RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 H3BNH8 94 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 CDC42EP2O14613 210 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 GNB5O14775 395 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 KLF4O43474 513 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 SCO2O43819 266 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 RAD1O60671 282 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 PPM1BO75688 479 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 SMNDC1O75940 238 aaKnown RBP eCLIP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 MAKP20794 623 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 CHMP24386 653 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 STAT5AP42229 794 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 GPR4P46093 362 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 PNLIPRP2P54317 469 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 PSMD4P55036 377 aaKnown RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 ISL1P61371 349 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 GABREP78334 506 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 RPP38P78345 283 aaKnown RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 CD47Q08722 323 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 ST3GAL3Q11203 375 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 SRSF6Q13247 344 aaKnown RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 EIF3IQ13347 325 aaKnown RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 DNASE1L3Q13609 305 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 TOMM34Q15785 309 aaPredicted RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 C1orf94Q6P1W5 598 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 RANBP3LQ86VV4 465 aaPredicted RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 IQCF1Q8N6M8 205 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 C7orf57Q8NEG2 295 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 ZNF555Q8NEP9 628 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 OR8D4Q8NGM9 314 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 CNIH3Q8TBE1 160 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 PHOSPHO1Q8TCT1 267 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 APH1BQ8WW43 257 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 TP53INP1Q96A56 240 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 SH3YL1Q96HL8 342 aaPredicted RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 FAM46AQ96IP4 442 aaKnown RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 NPAS1Q99742 590 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 ZNF559Q9BR84 538 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 DGCR6LQ9BY27 220 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 PLA2G12AQ9BZM1 189 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 UCK2Q9BZX2 261 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 GALNT9Q9HCQ5 603 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 ATP13A2Q9NQ11 1180 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 MEPEQ9NQ76 525 aaPredicted RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 DLL3Q9NYJ7 618 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 TESQ9UGI8 421 aaKnown RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 IL17BQ9UHF5 180 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 FARSAQ9Y285 508 aaKnown RBP5.29□□□□□ -1.56
TTC39C-201ENST00000304621 POFUT2Q9Y2G5 429 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 ORC6Q9Y5N6 252 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 PTPRBP23467 1997 aa5.29□□□□□ -1.56
TTC39C-201ENST00000304621 SYNDIG1LA6NDD5 238 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 POM121CA8CG34 1229 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 KPNA4O00629 521 aaPredicted RBP5.28□□□□□ -1.56
TTC39C-201ENST00000304621 SCDO00767 359 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 FMO6PO60774 539 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ZFAND5O76080 213 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ADAP00813 363 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 UBL4AP11441 157 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 CSRP1P21291 193 aaKnown RBP5.28□□□□□ -1.56
TTC39C-201ENST00000304621 EVI2BP34910 448 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 DLSTP36957 453 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ADH7P40394 386 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 PTGDSP41222 190 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 NOVA1P51513 510 aaKnown RBP5.28□□□□□ -1.56
TTC39C-201ENST00000304621 GAS1P54826 345 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 SMIM11AP58511 58 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 FXYD6P3P58550 94 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 BLMHQ13867 455 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 TGIF1Q15583 401 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 RFX4Q33E94 735 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 PLAG1Q6DJT9 500 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 TMEM154Q6P9G4 183 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ZNF730Q6ZMV8 503 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 MBOAT2Q6ZWT7 520 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 NRMQ8IXM6 262 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 CMIPQ8IY22 773 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ZNF786Q8N393 782 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 CADM2Q8N3J6 435 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 NLGN4YQ8NFZ3 816 aaPredicted RBP5.28□□□□□ -1.56
TTC39C-201ENST00000304621 OR8K3Q8NH51 312 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 FBLIM1Q8WUP2 373 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 RNF138Q8WVD3 245 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ACOT11Q8WXI4 607 aaPredicted RBP5.28□□□□□ -1.56
TTC39C-201ENST00000304621 RASL10BQ96S79 203 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 RHNO1Q9BSD3 238 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 HOXD1Q9GZZ0 328 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 EGLN3Q9H6Z9 239 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ZNF696Q9H7X3 374 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 MMP25Q9NPA2 562 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 PNPLA3Q9NST1 481 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 ZNF226Q9NYT6 803 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 MYOTQ9UBF9 498 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 FBXL4Q9UKA2 621 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 MGAT4BQ9UQ53 548 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 RNF6Q9Y252 685 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 GMPPBQ9Y5P6 360 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 CPAMD8Q8IZJ3 1885 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 IGKV1D-42A0A075B6H8 117 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 NSG1A0A0A6YYJ2 146 aa5.28□□□□□ -1.56
TTC39C-201ENST00000304621 OR6C70A6NIJ9 312 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms