RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ZC3H14Q6PJT7 736 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ZFP41Q8N8Y5 198 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 IL17RDQ8NFM7 739 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ACOT11Q8WXI4 607 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SLC22A23A1A5C7 686 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF840PA6NDX5 716 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SLC2A5P22732 501 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 HBG1P69891 147 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 HBG2P69892 147 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ID2Q02363 134 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 TLE4Q04727 773 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 LMX1AQ8TE12 382 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 OR1F2PQ96R84 312 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 NICN1Q9BSH3 213 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 LTBP3Q9NS15 1303 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SCO2O43819 266 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CD63P08962 238 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 DRD5P21918 477 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 IMPA1P29218 277 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 KCNJ5P48544 419 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 RIN1Q13671 783 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PDE7AQ13946 482 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 AARDQ4LEZ3 155 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SLC22A25Q6T423 547 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF546Q86UE3 836 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF679Q8IYX0 411 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 C12orf45Q8N5I9 185 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 FBXO27Q8NI29 283 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 COL22A1Q8NFW1 1626 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 RBBP6Q7Z6E9 1792 aaKnown RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 FOXE1O00358 373 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 RAB4AP20338 218 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 HSD17B7P56937 341 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SPCS2Q15005 226 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PLK5Q496M5 336 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 GALNT10Q86SR1 603 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SKA3Q8IX90 412 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM239Q8WW34 195 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 IGSF21Q96ID5 467 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 TP53TG5Q9Y2B4 290 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 TSPAN11A1L157 253 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 KCNK2O95069 426 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SERPINA5P05154 406 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SLC11A1P49279 550 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PGGHGQ32M88 737 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 LY6G5CQ5SRR4 150 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 AVPI1Q5T686 147 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PLXDC1Q8IUK5 500 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CPEB1Q9BZB8 566 aaKnown RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ACPTQ9BZG2 426 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 MRPL15Q9P015 296 aaKnown RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 RBPJLQ9UBG7 517 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF443Q9Y2A4 671 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SSC5DA1L4H1 1573 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 DOCK1Q14185 1865 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 C20orf202A1L168 122 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SULT1B1O43704 296 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CACNG3O60359 315 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 GPR32O75388 356 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ACPPP15309 386 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CTXN1P60606 82 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 C11orf91Q3C1V1 193 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 Q6ZVL8 140 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CBLL1Q75N03 491 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF454Q8N9F8 522 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 OR5L1Q8NGL2 311 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 IGSF8Q969P0 613 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 RAB39BQ96DA2 213 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PDLIM5Q96HC4 596 aaKnown RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF578Q96N58 590 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 F2RL3Q96RI0 385 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 UHRF1Q96T88 793 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ACSS1Q9NUB1 689 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ARGFXA6NJG6 315 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 C17orf112F2Z3M2 114 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 TGM5O43548 720 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 MT-ND4P03905 459 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 JUNBP17275 347 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ITGB7P26010 798 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 MTNR1BP49286 362 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PER3P56645 1201 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SCGB2A2Q13296 93 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 KIR2DS3Q14952 304 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 DEFB132Q7Z7B7 95 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SLC2A12Q8TD20 617 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF384Q8TF68 577 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CASD1Q96PB1 797 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SLC29A1Q99808 456 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SAMD10Q9BYL1 202 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 OLAHQ9NV23 265 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 OR6C2Q9NZP2 312 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 RASD1Q9Y272 281 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 URB1O60287 2271 aaKnown RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ADARB1P78563 741 aaKnown RBP7.19□□□□□ -1.26
SF3B3-201ENST00000302516 PRKCZQ05513 592 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ACSM3Q53FZ2 586 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 RAET1LQ5VY80 246 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CARD17Q5XLA6 110 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF322Q6U7Q0 402 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms