RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ICAM5Q9UMF0 924 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 C15orf41Q9Y2V0 281 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 CHCHD2Q9Y6H1 151 aaPredicted RBP22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 SH3PXD2BA1X283 911 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 SPTBN2O15020 2390 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 CCNB2O95067 398 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 PTGDSP41222 190 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 ZNF117Q03924 483 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 CRTC2Q53ET0 693 aaPredicted RBP22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 ATP1A1-AS1Q5TC04 95 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 B3GNTL1Q67FW5 361 aaPredicted RBP22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 TMEM81Q6P7N7 255 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 PODNL1Q6PEZ8 512 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 EML6Q6ZMW3 1958 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 MISPQ8IVT2 679 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 SIRT6Q8N6T7 355 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 TOR1AIP2Q8NFQ8 470 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 OR10G2Q8NGC3 310 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 ASB15Q8WXK1 588 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 THAP4Q8WY91 577 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 NTNG2Q96CW9 530 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 FEVQ99581 238 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 PRSS27Q9BQR3 290 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 TMEM27Q9HBJ8 222 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 SH2D2AQ9NP31 389 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 TMCC3Q9ULS5 477 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 A0A0B4J2E0 115 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 A0A1B0GX12 115 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 C17orf51A8MQB3 221 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 FAAHO00519 579 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 NKX2-8O15522 239 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 CLK3P49761 638 aaKnown RBP22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 FGD3Q5JSP0 725 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 ACER2Q5QJU3 275 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 IL20RBQ6UXL0 311 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 NKAIN4Q8IVV8 208 aa22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 SECISBP2Q96T21 854 aaKnown RBP22.51■■□□□ 1.19
GTF2A1-201ENST00000298173 A0A087WUU8 490 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 SCO2O43819 266 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 ANXA8P13928 327 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 RYKP34925 604 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 CASP3P42574 277 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 FOXD4Q12950 439 aaPredicted RBP22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 MEP1AQ16819 746 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 DUSP19Q8WTR2 217 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 FGF11Q92914 225 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 RDH12Q96NR8 316 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 KLHDC3Q9BQ90 382 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 SMPD3Q9NY59 655 aaPredicted RBP22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 SLC7A7Q9UM01 511 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 MSRB2Q9Y3D2 182 aa22.5■■□□□ 1.19
GTF2A1-201ENST00000298173 A0A1B0GWA3 101 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 TP53I11O14683 189 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 LINGO3P0C6S8 592 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 CBLP22681 906 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 HSPA13P48723 471 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 ST13P50502 369 aaKnown RBP22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 SOX8P57073 446 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 C17orf67Q0P5P2 114 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 ZNF468Q5VIY5 522 aaPredicted RBP22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 TMEM156Q8N614 296 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 OR9Q2Q8NGE9 314 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 SLC38A4Q969I6 547 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 ZNF524Q96C55 264 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 LHPPQ9H008 270 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 HCRTR2O43614 444 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 SNAP29O95721 258 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 GASTP01350 101 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 LSM11P83369 360 aaKnown RBP eCLIP22.49■■□□□ 1.195e-28■■■■■ 119.6
GTF2A1-201ENST00000298173 BICRALQ6AI39 1079 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 LINC00471Q8N535 108 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 PAQR8Q8TEZ7 354 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 OSBPL11Q9BXB4 747 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 RAB26Q9ULW5 256 aa22.49■■□□□ 1.19
GTF2A1-201ENST00000298173 CPAMD8Q8IZJ3 1885 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 ASPMQ8IZT6 3477 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 AKAP13Q12802 2813 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 B4DXG7 233 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 UQCRBP14927 111 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 SLC6A8P48029 635 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 P2RX1P51575 399 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 SNTA1Q13424 505 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 LINC00114Q6XXX2 140 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 WDR88Q6ZMY6 472 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 APLFQ8IW19 511 aaPredicted RBP22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 ATG16L2Q8NAA4 619 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 CLEC1AQ8NC01 280 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 OR4K5Q8NGD3 323 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 OR5W2Q8NH69 310 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 ACOT11Q8WXI4 607 aaPredicted RBP22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 SGCZQ96LD1 299 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 FRMD6Q96NE9 622 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 GALNT9Q9HCQ5 603 aa22.48■■□□□ 1.19
GTF2A1-201ENST00000298173 IGLV3-32A0A0A0MS00 114 aa22.47■■□□□ 1.19
GTF2A1-201ENST00000298173 CHP2O43745 196 aa22.47■■□□□ 1.19
GTF2A1-201ENST00000298173 NTN1O95631 604 aa22.47■■□□□ 1.19
GTF2A1-201ENST00000298173 ULK3Q6PHR2 472 aa22.47■■□□□ 1.19
GTF2A1-201ENST00000298173 TFAP2CQ92754 450 aa22.47■■□□□ 1.19
GTF2A1-201ENST00000298173 SH3YL1Q96HL8 342 aaPredicted RBP22.47■■□□□ 1.19
GTF2A1-201ENST00000298173 NIPSNAP1Q9BPW8 284 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms