RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 CD200R1Q8TD46 325 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 B3GALT2O43825 422 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 OR2T1O43869 369 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 TRHRP34981 398 aaPredicted RBP4.59□□□□□ -1.68
CSMD3-201ENST00000297405 NDUFV1P49821 464 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 FCGRTP55899 365 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 BIDP55957 195 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF155Q12901 538 aaPredicted RBP4.59□□□□□ -1.68
CSMD3-201ENST00000297405 CTF1Q16619 201 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 HSD17B13Q7Z5P4 300 aaPredicted RBP4.59□□□□□ -1.68
CSMD3-201ENST00000297405 WDR5BQ86VZ2 330 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 KLBQ86Z14 1044 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 LRRN4CLQ8ND94 238 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 SUCNR1Q9BXA5 334 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 ZBTB20Q9HC78 741 aaPredicted RBP4.59□□□□□ -1.68
CSMD3-201ENST00000297405 KCNMB3Q9NPA1 279 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 RASD1Q9Y272 281 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 ACTL7AQ9Y615 435 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 C2orf92A0A1B0GVN3 265 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 C2orf72A6NCS6 295 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 GPR39O43194 453 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 CAV2P51636 162 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 AKR1C2P52895 323 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 IL10RBQ08334 325 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 TMPRSS11FQ6ZWK6 438 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 GIMAP1Q8WWP7 306 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 SPTSSAQ969W0 71 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 FAM136AQ96C01 138 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 EID2BQ96D98 161 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 SHARPINQ9H0F6 387 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 A0A1W2PQ09 198 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TRBC2A0A5B9 178 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 J3KR12 359 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 hCG_2039718K7EN88 272 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SNRNP70P08621 437 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ITGB8P26012 769 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SLC11A1P49279 550 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SUB1P53999 127 aaKnown RBP eCLIP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 LRP11Q86VZ4 500 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PGBD5Q8N414 524 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 OR5AK2Q8NH90 309 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 P2RX7Q99572 595 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 EXOSC3Q9NQT5 275 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TECPR2O15040 1411 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZFYVE26Q68DK2 2539 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TLN1Q9Y490 2541 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 DOT1LQ8TEK3 1739 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SNNO75324 88 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 KCNE1P15382 129 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GABRB3P28472 473 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TNFRSF17Q02223 184 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 IRF5Q13568 498 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF679Q8IYX0 411 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 NAT8LQ8N9F0 302 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 RAB37Q96AX2 223 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GMPPAQ96IJ6 420 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CASD1Q96PB1 797 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CRAMP1Q96RY5 1269 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SPG21Q9NZD8 308 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 HMSDA8MTL9 139 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 MATN3O15232 486 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SPATA31D3P0C874 917 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PGCP20142 388 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 G6PCP35575 357 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM62Q0P6H9 643 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SPATA31D4Q6ZUB0 917 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GPR155Q7Z3F1 870 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 MMP21Q8N119 569 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PPP1R35Q8TAP8 253 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TSLPQ969D9 159 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 MFSD3Q96ES6 412 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 APOLD1Q96LR9 279 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SEMA3CQ99985 751 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TCAPO15273 167 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TFPIP10646 304 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PFKLP17858 780 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 AQP1P29972 269 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 RPL7L1Q6DKI1 246 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 OPN5Q6U736 354 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 AMZ2Q86W34 360 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM145Q8NBT3 493 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TBL1XR1Q9BZK7 514 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 AGO3Q9H9G7 860 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SLCO3A1Q9UIG8 710 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 JAG2Q9Y219 1238 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 NRP1O14786 923 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF780AO75290 641 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 OSMP13725 252 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SFTPDP35247 375 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GATMP50440 423 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF695Q8IW36 515 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GLB1L2Q8IW92 636 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF582Q96NG8 517 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 C14orf119Q9NWQ9 140 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PRODH2Q9UF12 536 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 F8VP50 259 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SURF4O15260 269 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SLC16A6O15403 523 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PBX2P40425 430 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PTGIRP43119 386 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms