RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 ADH1BP00325 375 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 HNRNPA2B1P22626 353 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 DHCR24Q15392 516 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 OR13C2Q8NGS9 318 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 B3GAT2Q9NPZ5 323 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 A0A1W2PPV4 95 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PI15O43692 258 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 AHRP35869 848 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 GDNFP39905 211 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PRR18Q8N4B5 295 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 KLK6Q92876 244 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 ELOVL1Q9BW60 279 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 CD244Q9BZW8 370 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 IL26Q9NPH9 171 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 TDP1Q9NUW8 608 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 A0A087X0M5 115 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 A0A1B0GX30 115 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 CLDN24A6NM45 220 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 SLC22A6Q4U2R8 563 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PSRC1Q6PGN9 363 aaPredicted RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 TRAPPC6BQ86SZ2 158 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 OR8J2Q8NGG1 315 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 DOK4Q8TEW6 326 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 SYT17Q9BSW7 474 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 ANHXE9PGG2 379 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 MSTNO14793 375 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 SMPD1P17405 629 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 STC1P52823 247 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 RAB11AP62491 216 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 ZNF74Q16587 644 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 AMZ2Q86W34 360 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 SERINC1Q9NRX5 453 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 EHFQ9NZC4 300 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 CHRNA9Q9UGM1 479 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 APEX1P27695 318 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 DAOAP59103 153 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 TLE4Q04727 773 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 LRFN4Q6PJG9 635 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 ETV3LQ6ZN32 361 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 CLDN19Q8N6F1 224 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 TMEM125Q96AQ2 219 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 TRMT2BQ96GJ1 504 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 TCRBV3S1A0A5B6 114 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 B4GALT2O60909 372 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 CD1DP15813 335 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 GLCCI1Q86VQ1 547 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 SUN3Q8TAQ9 357 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 VAMP8Q9BV40 100 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 CDCP1Q9H5V8 836 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PLEKHJ1Q9NW61 149 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 E7ESA3 106 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 OR4Q2P0C623 313 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 HOXB9P17482 250 aaPredicted RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 SLC6A20Q9NP91 592 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PCDHA2Q9Y5H9 948 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 PSMB1P20618 241 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 EXOSC2Q13868 293 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 GRIK5Q16478 980 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 C1orf127Q8N9H9 656 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 ZNF680Q8NEM1 530 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 HLA-CQ95604 372 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 SENP5Q96HI0 755 aaPredicted RBP11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 FBXO7Q9Y3I1 522 aa11.1□□□□□ -0.63
SHROOM3-201ENST00000296043 OR6C68A6NDL8 312 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 TMEM150CB9EJG8 249 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 GABRA2P47869 451 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 REEP5Q00765 189 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 ADPRMQ3LIE5 342 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 NRMQ8IXM6 262 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 FCRL5Q96RD9 977 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 DCLRE1CQ96SD1 692 aaKnown RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 TP53TG5Q9Y2B4 290 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 KPTNQ9Y664 436 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CSNK1G3Q9Y6M4 447 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 ZNF816-ZNF321PA0A0X1KG74 233 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 METTL15A6NJ78 407 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 SYT5O00445 386 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 OSMP13725 252 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 EVX2Q03828 476 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 LTBQ06643 244 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 ZNF321PQ8N8H1 164 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 GPR119Q8TDV5 335 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PRMT6Q96LA8 375 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 MCOLN1Q9GZU1 580 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 VSX1Q9NZR4 365 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CEBPZOSA8MTT3 80 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 GABRPO00591 440 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PDZD3Q86UT5 571 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms