RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 C3orf30Q96M34 536 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 TMEM204Q9BSN7 226 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 C1orf50Q9BV19 199 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ATAD3AQ9NVI7 634 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 GPATCH2Q9NW75 528 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ICAM5Q9UMF0 924 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 FAF1Q9UNN5 650 aaPredicted RBP17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ACTL7BQ9Y614 415 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 GJE1A6NN92 205 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 H3BNH8 94 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 GTPBP1O00178 669 aaKnown RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 HS3ST1O14792 307 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 SLU7O95391 586 aaKnown RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 C6orf47O95873 294 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 PAX1P15863 534 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 SUMO3P55854 103 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF844Q08AG5 666 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 RNPS1Q15287 305 aaKnown RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 TOMM34Q15785 309 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 NDUFAF6Q330K2 333 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 LSM12Q3MHD2 195 aaKnown RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 TMEM176BQ3YBM2 270 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 ATP6AP1LQ52LC2 224 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 C6orf136Q5SQH8 315 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 NUFIP2Q7Z417 695 aaKnown RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 TUSC5Q8IXB3 177 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF611Q8N823 705 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 ATP6V1C2Q8NEY4 427 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 STEAP2Q8NFT2 490 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 S100PBPQ96BU1 408 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 CXorf56Q9H5V9 222 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF701Q9NV72 531 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 KLHL13Q9P2N7 655 aa17.47■□□□□ 0.39
CXCL3-201ENST00000296026 GPC6Q9Y625 555 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-201ENST00000296026 GCM2O75603 506 aaPredicted RBP17.46■□□□□ 0.39
CXCL3-201ENST00000296026 LYPLA1O75608 230 aaPredicted RBP17.46■□□□□ 0.39
CXCL3-201ENST00000296026 SOX30O94993 753 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 NTN1O95631 604 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 KRT16P08779 473 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 PCSK6P29122 969 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 ATP12AP54707 1039 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 TSC22D1Q15714 1073 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 IL23RQ5VWK5 629 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 TFAP2EQ6VUC0 442 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 FCRLAQ7L513 359 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 GABRG1Q8N1C3 465 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 KRTCAP2Q8N6L1 136 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 NATD1Q8N6N6 113 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF614Q8N883 585 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 FNDC5Q8NAU1 212 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 GPR119Q8TDV5 335 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 AKAP1Q92667 903 aaKnown RBP eCLIP17.46■□□□□ 0.39
CXCL3-201ENST00000296026 COQ8BQ96D53 544 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 PRPF18Q99633 342 aaKnown RBP17.46■□□□□ 0.39
CXCL3-201ENST00000296026 TACO1Q9BSH4 297 aaKnown RBP17.46■□□□□ 0.39
CXCL3-201ENST00000296026 HDHD5Q9BXW7 423 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 COQ10BQ9H8M1 238 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 ANKZF1Q9H8Y5 726 aa17.46■□□□□ 0.39
CXCL3-201ENST00000296026 FN1P02751 2386 aaKnown RBP17.46■□□□□ 0.39
CXCL3-201ENST00000296026 NPIPB9F8W1W9 429 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 CFLARO15519 480 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 TMCC2O75069 709 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 SPAG7O75391 227 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 SKAP2O75563 359 aaPredicted RBP17.45■□□□□ 0.38
CXCL3-201ENST00000296026 PRKD3O94806 890 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 PRKCAP17252 672 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 ARRB2P32121 409 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 SFRP5Q5T4F7 317 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 RIBC1Q8N443 379 aaPredicted RBP17.45■□□□□ 0.38
CXCL3-201ENST00000296026 OR5AK3PQ8NH89 298 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 RFWD2Q8NHY2 731 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 RAB3IL1Q8TBN0 382 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 SFXN5Q8TD22 340 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 TCP10LQ8TDR4 215 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 ZFP90Q8TF47 636 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.45■□□□□ 0.38
CXCL3-201ENST00000296026 MRGPRX4Q96LA9 322 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 OR7D2Q96RA2 312 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 GP6Q9HCN6 339 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 DTNAQ9Y4J8 743 aa17.45■□□□□ 0.38
CXCL3-201ENST00000296026 YES1P07947 543 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 PRPS1L1P21108 318 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 IL32P24001 234 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 ATP5J2P56134 94 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 RIMKLAQ8IXN7 391 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 TMCO5AQ8N6Q1 288 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 OR5D16Q8NGK9 328 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 MOAP1Q96BY2 351 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 ZNF524Q96C55 264 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 DUSP26Q9BV47 211 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 BHLHE41Q9C0J9 482 aaPredicted RBP17.44■□□□□ 0.38
CXCL3-201ENST00000296026 ZDHHC2Q9UIJ5 367 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 LAMP3Q9UQV4 416 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 RNF115Q9Y4L5 304 aa17.44■□□□□ 0.38
CXCL3-201ENST00000296026 IGHV3-15A0A0B4J1V0 119 aa17.43■□□□□ 0.38
CXCL3-201ENST00000296026 ZNF264O43296 627 aa17.43■□□□□ 0.38
CXCL3-201ENST00000296026 ADAP00813 363 aa17.43■□□□□ 0.38
CXCL3-201ENST00000296026 ENPP1P22413 925 aa17.43■□□□□ 0.38
CXCL3-201ENST00000296026 SLC7A1P30825 629 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms