RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PMM1Q92871 262 aa13.84□□□□□ -0.19
CCDC140-201ENST00000295226 JSRP1Q96MG2 331 aaPredicted RBP13.84□□□□□ -0.19
CCDC140-201ENST00000295226 DOHHQ9BU89 302 aa13.84□□□□□ -0.19
CCDC140-201ENST00000295226 PINK1Q9BXM7 581 aa13.84□□□□□ -0.19
CCDC140-201ENST00000295226 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF71Q9NQZ8 489 aaPredicted RBP13.84□□□□□ -0.19
CCDC140-201ENST00000295226 PCDHGA9Q9Y5G4 932 aaKnown RBP13.84□□□□□ -0.19
CCDC140-201ENST00000295226 PKD1L2Q7Z442 2459 aa13.84□□□□□ -0.19
CCDC140-201ENST00000295226 CDHR4A6H8M9 788 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 PINLYPA6NC86 204 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 ADAM11O75078 769 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 LGI1O95970 557 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 PRG2P13727 222 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 PRKAR1BP31321 381 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 TNFSF10P50591 281 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 ATP6AP1Q15904 470 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 COL28A1Q2UY09 1125 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 HMBOX1Q6NT76 420 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 DHRS4L2Q6PKH6 230 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 PYURFQ96I23 114 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 BDH2Q9BUT1 245 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 UGT2B28Q9BY64 529 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 RNF32Q9H0A6 362 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 SEMA6AQ9H2E6 1030 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 ZNF696Q9H7X3 374 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 TIMMDC1Q9NPL8 285 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 SACM1LQ9NTJ5 587 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 DNAJB12Q9NXW2 375 aaKnown RBP13.83□□□□□ -0.2
CCDC140-201ENST00000295226 MED11Q9P086 117 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 RPS6KA6Q9UK32 745 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 TP53TG5Q9Y2B4 290 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 NTNG1Q9Y2I2 539 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 NBEAQ8NFP9 2946 aa13.83□□□□□ -0.2
CCDC140-201ENST00000295226 GNB5O14775 395 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 HCRTR2O43614 444 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ITGB2P05107 769 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 SP1P08047 785 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 LINGO3P0C6S8 592 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 UBL4AP11441 157 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 RYKP34925 604 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 RFC3P40938 356 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 CLK3P49761 638 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ZNF117Q03924 483 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 SLC25A25Q6KCM7 469 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 GALNTL5Q7Z4T8 443 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 SULF2Q8IWU5 870 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 EID3Q8N140 333 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 PROX1Q92786 737 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ZNF524Q96C55 264 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ARHGAP9Q9BRR9 750 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ANGPTL4Q9BY76 406 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 OLAHQ9NV23 265 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 CNIH4Q9P003 139 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ABCG2Q9UNQ0 655 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 SAMD4AQ9UPU9 718 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 WIF1Q9Y5W5 379 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ITPR1Q14643 2758 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 A0A1W2PQD3 144 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 EIF4E1BA6NMX2 242 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 H3BNH8 94 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 LDLRP01130 860 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 CNR1P21554 472 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 YAP1P46937 504 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 CCR4P51679 360 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 RPP38P78345 283 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 FAM98BQ52LJ0 330 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ZNF766Q5HY98 468 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 COLEC12Q5KU26 742 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 RNF220Q5VTB9 566 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 AMIGO2Q86SJ2 522 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 CARM1Q86X55 608 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 CHERPQ8IWX8 916 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 ZADH2Q8N4Q0 377 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 TMCO5AQ8N6Q1 288 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 WDSUB1Q8N9V3 476 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 OR6T1Q8NGN1 323 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 LZICQ8WZA0 190 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 GNRHR2Q96P88 292 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 SECISBP2Q96T21 854 aaKnown RBP13.82□□□□□ -0.2
CCDC140-201ENST00000295226 CTPS2Q9NRF8 586 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 PPP4R1LQ9P1A2 415 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 SLC13A4Q9UKG4 626 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 BAG5Q9UL15 447 aa13.82□□□□□ -0.2
CCDC140-201ENST00000295226 hCG_2039718K7EN88 272 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 AP3D1O14617 1153 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 ZNF264O43296 627 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 TPST2O60704 377 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 DEAF1O75398 565 aaPredicted RBP13.81□□□□□ -0.2
CCDC140-201ENST00000295226 RAP2AP10114 183 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 CD46P15529 392 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 TCEA1P23193 301 aaKnown RBP13.81□□□□□ -0.2
CCDC140-201ENST00000295226 ADH7P40394 386 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 FOXK2Q01167 660 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 CHRNB3Q05901 458 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 SKP2Q13309 424 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 ELOAQ14241 798 aaKnown RBP13.81□□□□□ -0.2
CCDC140-201ENST00000295226 NPTX1Q15818 432 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 NRF1Q16656 503 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 ST3GAL2Q16842 350 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms