RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TRIP6Q15654 476 aaKnown RBP15.55■□□□□ 0.08
CPSF4-201ENST00000292476 KLHL22Q53GT1 634 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 TRMT12Q53H54 448 aaKnown RBP15.55■□□□□ 0.08
CPSF4-201ENST00000292476 C3orf38Q5JPI3 329 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 STEAP3Q658P3 488 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 FAM111BQ6SJ93 734 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 QSOX2Q6ZRP7 698 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 TMPRSS9Q7Z410 1059 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 SNX29P2Q8IUI4 249 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 CHAC2Q8WUX2 184 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 C16orf58Q96GQ5 468 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 OR6C1Q96RD1 312 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 ARHGDIGQ99819 225 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 YIPF4Q9BSR8 244 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 NUAK2Q9H093 628 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 ADAP2Q9NPF8 381 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 SATB2Q9UPW6 733 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 MAU2Q9Y6X3 613 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 UNC13CQ8NB66 2214 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 CACNA1AO00555 2505 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 D6RAR5 112 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 M0R3H8 397 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 GPX5O75715 221 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 RAB36O95755 333 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 GIPRP48546 466 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 MGAT2Q10469 447 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 PIN1Q13526 163 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-201ENST00000292476 PHF19Q5T6S3 580 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 ARHGAP40Q5TG30 622 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 HEPHL1Q6MZM0 1159 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 ZER1Q7Z7L7 766 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 PPP1R3BQ86XI6 285 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 SLC34A3Q8N130 599 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 METTL27Q8N6F8 245 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TCEANCQ8N8B7 351 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 GNPDA2Q8TDQ7 276 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 SLC9A6Q92581 669 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 FGF11Q92914 225 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 RBCK1Q9BYM8 510 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 DHCR7Q9UBM7 475 aaKnown RBP15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TESQ9UGI8 421 aaKnown RBP15.54■□□□□ 0.08
CPSF4-201ENST00000292476 ITGB1BP2Q9UKP3 347 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 PCDHGB6Q9Y5F9 930 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 SPEGQ15772 3267 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 ZNF670-ZNF695F2Z2N8 137 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 MYL12BO14950 172 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TBX1O43435 398 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 PRAMEF2O60811 474 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 EPPINO95925 133 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 IFNA8P32881 189 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 PTGER1P34995 402 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 OR1D4P47884 311 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TMEM44Q2T9K0 475 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 ARHGAP11BQ3KRB8 267 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 SYT14P1Q58G82 188 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 COMTD1Q86VU5 262 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 SLITRK4Q8IW52 837 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 AGBL5Q8NDL9 886 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TOR1AIP2Q8NFQ8 470 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 OR6T1Q8NGN1 323 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TXNDC15Q96J42 360 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 PTCHD1Q96NR3 888 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 WDFY2Q96P53 400 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 MTHFD2LQ9H903 347 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-201ENST00000292476 POLE3Q9NRF9 147 aa15.54■□□□□ 0.08
CPSF4-201ENST00000292476 AKAP7Q9P0M2 348 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TMEM184BQ9Y519 407 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-201ENST00000292476 TPST2O60704 377 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 CDC123O75794 336 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-201ENST00000292476 IFNA16P05015 189 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 TNNI3P19429 210 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 CRYBB2P43320 205 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 ERV3-1Q14264 604 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 GINS1Q14691 196 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 TRAM2Q15035 370 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 SOWAHCQ53LP3 525 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-201ENST00000292476 POC5Q8NA72 575 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 SLC16A11Q8NCK7 471 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 RCBTB1Q8NDN9 531 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 OR7G1Q8NGA0 311 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 SLC35A4Q96G79 324 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 WFDC6Q9BQY6 131 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 ASPNQ9BXN1 380 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 TGIF2Q9GZN2 237 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 RNF167Q9H6Y7 350 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 SMURF1Q9HCE7 757 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 FGF20Q9NP95 211 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-201ENST00000292476 LANCL2Q9NS86 450 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 CCDC88CQ9P219 2028 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 PRODH2Q9UF12 536 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 SLC13A4Q9UKG4 626 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 ZNF232Q9UNY5 417 aa15.53■□□□□ 0.08
CPSF4-201ENST00000292476 SLC35F4A4IF30 521 aa15.52■□□□□ 0.08
CPSF4-201ENST00000292476 PRKYO43930 277 aa15.52■□□□□ 0.08
CPSF4-201ENST00000292476 SCRG1O75711 98 aa15.52■□□□□ 0.08
CPSF4-201ENST00000292476 ALPPP05187 535 aa15.52■□□□□ 0.08
CPSF4-201ENST00000292476 GUSBP08236 651 aa15.52■□□□□ 0.08
CPSF4-201ENST00000292476 PRKAR1BP31321 381 aa15.52■□□□□ 0.08
CPSF4-201ENST00000292476 BTG2P78543 158 aa15.52■□□□□ 0.08
CPSF4-201ENST00000292476 ZFP36L1Q07352 338 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms