RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TNS1Q9HBL0 1735 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 C5orf42Q9H799 3197 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 KDM4EB2RXH2 506 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 GFYI3L273 518 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 DLGAP1O14490 977 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ITGA10O75578 1167 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZNF432O94892 652 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ARAFP10398 606 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ITGAMP11215 1152 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 IDUAP35475 653 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PPP5CP53041 499 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 INAVAQ3KP66 663 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 LACC1Q8IV20 430 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PIAS4Q8N2W9 510 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 SDR16C5Q8N3Y7 309 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZNF431Q8TF32 576 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 RSC1A1Q92681 617 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZDHHC12Q96GR4 267 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TNFRSF13CQ96RJ3 184 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 MCOLN1Q9GZU1 580 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 NTN4Q9HB63 628 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 DZANK1Q9NVP4 752 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 GDE1Q9NZC3 331 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TBX21Q9UL17 535 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TRAPPC13A5PLN9 417 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ACOD1A6NK06 481 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PRODHO43272 600 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 RBMXL2O75526 392 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 APBB3O95704 486 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 OXSR1O95747 527 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 ADAP00813 363 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TACSTD2P09758 323 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 GTF2F2P13984 249 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 FOSL1P15407 271 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SOX18P35713 384 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZNF41P51814 821 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 OR1D5P58170 312 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 P2RY14Q15391 338 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 KCNJ8Q15842 424 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PRSS36Q5K4E3 855 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 RAET1LQ5VY80 246 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 OR13C3Q8NGS6 347 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 OR6N1Q8NGY5 312 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TMEM41AQ96HV5 264 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SERINC2Q96SA4 455 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TMEM246Q9BRR3 403 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PAK6Q9NQU5 681 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 TAS2R10Q9NYW0 307 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 A0A0B4J203 849 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 A0A1W2PQ09 198 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZNF879B4DU55 563 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZNF878C9JN71 531 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SLC33A1O00400 549 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 HMGN4O00479 90 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ADAM23O75077 832 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TPMTP51580 245 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ADARB1P78563 741 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 NKAPLQ5M9Q1 402 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 C9orf135Q5VTT2 229 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 DNAJC5GQ8N7S2 189 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ANKRD53Q8N9V6 530 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 POGLUT1Q8NBL1 392 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 OR6Q1Q8NGQ2 317 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 OR13C5Q8NGS8 318 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 FKBP10Q96AY3 582 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 HS6ST2Q96MM7 605 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZMAT3Q9HA38 289 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 LIPT1Q9Y234 373 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 RASD1Q9Y272 281 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 CEP250Q9BV73 2442 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 POLEQ07864 2286 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 INMT-MINDY4F8WBC2 141 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 AHSA1O95433 338 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 CD2P06729 351 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 ETV5P41161 510 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 MAP2K3P46734 347 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 ETV1P50549 477 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 EPHA5P54756 1037 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 DUSP5Q16690 384 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 STEAP3Q658P3 488 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 ACSM5Q6NUN0 579 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 TSSK4Q6SA08 328 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 PRSS41Q7RTY9 318 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 TMEM151BQ8IW70 566 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 SFTPA2Q8IWL1 248 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 DIO2Q92813 273 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 RASD2Q96D21 266 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 KLHL9Q9P2J3 617 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 LRIT1Q9P2V4 623 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 MBD2Q9UBB5 411 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 ICE1Q9Y2F5 2266 aa4.46□□□□□ -1.69
UBR1-201ENST00000290650 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 TNFSF12O43508 249 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 FZD6O60353 706 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 F3P13726 295 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 MMP11P24347 488 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 SSTR2P30874 369 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 RABIFP47224 123 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 ISL1P61371 349 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 PPP1CAP62136 330 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms