RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 HCAR1Q9BXC0 346 aa17.8■□□□□ 0.44
BRAF-201ENST00000288602 NXF2Q9GZY0 626 aaKnown RBP17.8■□□□□ 0.44
BRAF-201ENST00000288602 FGF20Q9NP95 211 aaPredicted RBP17.8■□□□□ 0.44
BRAF-201ENST00000288602 MRPS18AQ9NVS2 196 aaKnown RBP17.8■□□□□ 0.44
BRAF-201ENST00000288602 TOR4AQ9NXH8 423 aa17.8■□□□□ 0.44
BRAF-201ENST00000288602 CCDC59Q9P031 241 aaKnown RBP17.8■□□□□ 0.44
BRAF-201ENST00000288602 OR10H1Q9Y4A9 318 aa17.8■□□□□ 0.44
BRAF-201ENST00000288602 CACNA1IQ9P0X4 2223 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 CTDSP2O14595 271 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 CFHR1Q03591 330 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 PRKCDQ05655 676 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 TEX12Q9BXU0 123 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 STUB1Q9UNE7 303 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 MED31Q9Y3C7 131 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 HEATR5AQ86XA9 2040 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 RP1P56715 2156 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 A0A0B4J2E0 115 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 A0A1B0GX12 115 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 TMEM150CB9EJG8 249 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 PLD2O14939 933 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 PRAMEF2O60811 474 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 OGFOD3Q6PK18 319 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 GATAD2AQ86YP4 633 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 EFHD2Q96C19 240 aaPredicted RBP17.79■□□□□ 0.44
BRAF-201ENST00000288602 NELL2Q99435 816 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 ZNF559Q9BR84 538 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 Q9N2J8 555 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 POLE3Q9NRF9 147 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 ABCB10Q9NRK6 738 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 PNO1Q9NRX1 252 aaKnown RBP17.79■□□□□ 0.44
BRAF-201ENST00000288602 SNTG1Q9NSN8 517 aa17.79■□□□□ 0.44
BRAF-201ENST00000288602 SMIM30A4D0T7 59 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 OR2B3O76000 313 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 LALBAP00709 142 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 TSPAN19P0C672 248 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 BMP7P18075 431 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 ATP6V1E1P36543 226 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 TRIM16LQ309B1 348 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 ALG10BQ5I7T1 473 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 Q7L0L9 218 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 CXXC5Q7LFL8 322 aaKnown RBP17.78■□□□□ 0.44
BRAF-201ENST00000288602 RNF113BQ8IZP6 322 aaKnown RBP17.78■□□□□ 0.44
BRAF-201ENST00000288602 BCORP1Q8N888 145 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 GATSQ8NAP1 163 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 OR9Q1Q8NGQ5 310 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 ZDHHC12Q96GR4 267 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 TM9SF2Q99805 663 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 IFT27Q9BW83 186 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 BARHL1Q9BZE3 327 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 NUAK2Q9H093 628 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 TBC1D17Q9HA65 648 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 SEC14L4Q9UDX3 406 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 EML5Q05BV3 1969 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 BHLHE40O14503 412 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 FMO6PO60774 539 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 ENDOUP21128 410 aaKnown RBP17.78■□□□□ 0.44
BRAF-201ENST00000288602 CD40LGP29965 261 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 S100A5P33763 92 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 SOX6P35712 828 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 PPP5CP53041 499 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 RPS25P62851 125 aaKnown RBP17.78■□□□□ 0.44
BRAF-201ENST00000288602 ZNF791Q3KP31 576 aaPredicted RBP17.78■□□□□ 0.44
BRAF-201ENST00000288602 C22orf42Q6IC83 251 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 BMP8AQ7Z5Y6 402 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 SPEM1Q8N4L4 309 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 SIRT6Q8N6T7 355 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 OR52L1Q8NGH7 329 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 OR51G2Q8NGK0 314 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 BRIX1Q8TDN6 353 aaKnown RBP17.78■□□□□ 0.44
BRAF-201ENST00000288602 RFKQ969G6 155 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 CUTCQ9NTM9 273 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 H2AFY2Q9P0M6 372 aaPredicted RBP17.78■□□□□ 0.44
BRAF-201ENST00000288602 WNT16Q9UBV4 365 aa17.78■□□□□ 0.44
BRAF-201ENST00000288602 C17orf105B2RV13 164 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 IFI6P09912 130 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 CPEP16870 476 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 SLC1A3P43003 542 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 TCTE1Q5JU00 501 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 GARNL3Q5VVW2 1013 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 NXNL2Q5VZ03 156 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 ZNF613Q6PF04 617 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 CDK20Q8IZL9 346 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 SLC25A45Q8N413 288 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 ZNF615Q8N8J6 731 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 TSLPQ969D9 159 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 CFL2Q9Y281 166 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 SIGLEC7Q9Y286 467 aa17.77■□□□□ 0.44
BRAF-201ENST00000288602 CAB39Q9Y376 341 aaPredicted RBP17.77■□□□□ 0.44
BRAF-201ENST00000288602 ARID1BQ8NFD5 2236 aaPredicted RBP17.77■□□□□ 0.44
BRAF-201ENST00000288602 A0A1B0GVT2 93 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 TBX1O43435 398 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 CLPSP04118 112 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 GTF2E2P29084 291 aaKnown RBP17.77■□□□□ 0.43
BRAF-201ENST00000288602 HSD17B7P56937 341 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 FUT7Q11130 342 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 GRM7Q14831 915 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 LAPTM4BQ86VI4 370 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 PARP16Q8N5Y8 322 aa17.77■□□□□ 0.43
BRAF-201ENST00000288602 FAM83FQ8NEG4 500 aaPredicted RBP17.77■□□□□ 0.43
BRAF-201ENST00000288602 PPP1R14BQ96C90 147 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms