RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MLNP12872 115 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ETS2P15036 469 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ACADSP16219 412 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 MAOAP21397 527 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 MSNP26038 577 aaKnown RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 CERS1P27544 350 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CHATP28329 748 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 HNRNPH3P31942 346 aaKnown RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 ARL2P36404 184 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 P2RY2P41231 377 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CASP4P49662 377 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 GEMP55040 296 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 PHEXP78562 749 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 NHLH1Q02575 133 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 LAMTOR4Q0VGL1 99 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ST3GAL1Q11201 340 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SLAMF1Q13291 335 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CDH18Q13634 790 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 PKP1Q13835 747 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CRMP1Q14194 572 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 GANABQ14697 944 aaKnown RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 SLC5A12Q1EHB4 618 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 DNAL1Q4LDG9 190 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 RNLSQ5VYX0 342 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 LIPJQ5W064 366 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TWF2Q6IBS0 349 aaKnown RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 DHRS13Q6UX07 377 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 HSDL2Q6YN16 418 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SLC35D2Q76EJ3 337 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ARCQ7LC44 396 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ARHGAP22Q7Z5H3 698 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 AKAP14Q86UN6 197 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SERPINA9Q86WD7 417 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CROCCP3Q8IVE0 287 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SFTPA1Q8IWL2 248 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 MUC20Q8N307 709 aaPredicted RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 EMC1Q8N766 993 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TERB1Q8NA31 727 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 MLKLQ8NB16 471 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SCCPDHQ8NBX0 429 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 RNF149Q8NC42 400 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 OR5AU1Q8NGC0 362 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 OR51G2Q8NGK0 314 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 OR5M8Q8NGP6 311 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 OR9G4Q8NGQ1 327 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ASB5Q8WWX0 329 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 HTR3CQ8WXA8 447 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 P3H4Q92791 437 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 DAZLQ92904 295 aaKnown RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 CD101Q93033 1021 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TMEM143Q96AN5 459 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 AKR1E2Q96JD6 320 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SERAC1Q96JX3 654 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 BBC3Q96PG8 261 aaPredicted RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 SH2D3AQ9BRG2 576 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 NDUFAF3Q9BU61 184 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 GATA5Q9BWX5 397 aaPredicted RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 PARD6GQ9BYG4 376 aaPredicted RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 PARD6BQ9BYG5 372 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 RAB34Q9BZG1 259 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CENPHQ9H3R5 247 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CWH43Q9H720 699 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 PPP1R3EQ9H7J1 279 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TLE6Q9H808 572 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 IL1RL2Q9HB29 575 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 DYRK4Q9NR20 520 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TREX1Q9NSU2 369 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ZFP57Q9NU63 452 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 KLHL13Q9P2N7 655 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 WRAP73Q9P2S5 460 aaPredicted RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 PHF11Q9UIL8 331 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SIX4Q9UIU6 781 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 EMCNQ9ULC0 261 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SCML1Q9UN30 329 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 FLVCR2Q9UPI3 526 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 EXOGQ9Y2C4 368 aaKnown RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 GSTK1Q9Y2Q3 226 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 LAMA3Q16787 3333 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 COL4A6Q14031 1691 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TRAV18A0A075B6X5 111 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 A0A1B0GUA9 196 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 PRSS51A0A1B0GVH4 220 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 A0A1W2PPE3 182 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CXorf65A6NEN9 183 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CENPBD1B2RD01 187 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 SLCO1B7G3V0H7 640 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 H3BQV1 296 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ARPC1BO15143 372 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 HSPA12AO43301 675 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 MSI1O43347 362 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 LATO43561 262 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 SYT7O43581 403 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 RGS11O94810 467 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 SEMA3DO95025 777 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 RPP14O95059 124 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 ANP32DO95626 131 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 TFPIP10646 304 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ZNF23P17027 643 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 GOT1P17174 413 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms