RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ARFGEF2Q9Y6D5 1785 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 AGPAT2O15120 278 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 GJA4P35212 333 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SEC61A1P61619 476 aaKnown RBP10.75□□□□□ -0.69
USP53-201ENST00000274030 GARNL3Q5VVW2 1013 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 INTS14Q96SY0 518 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 AGPAT4Q9NRZ5 378 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 WDPCPO95876 746 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 INHBCP55103 352 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 ERVFC1P60507 584 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 FGL1Q08830 312 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 PLGLAQ15195 96 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SLC22A10Q63ZE4 541 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 ZNF534Q76KX8 674 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 KCTD20Q7Z5Y7 419 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 IL17RDQ8NFM7 739 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SYNPRQ8TBG9 265 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 IL1F10Q8WWZ1 152 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 CHFRQ96EP1 664 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SYT3Q9BQG1 590 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 OR2B2Q9GZK3 357 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 EGLN3Q9H6Z9 239 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 OR6C2Q9NZP2 312 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 TAAR2Q9P1P5 351 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 PRLHRP49683 370 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SPOCK1Q08629 439 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 MPP7Q5T2T1 576 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 TEX19Q8NA77 164 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
USP53-201ENST00000274030 CHPT1Q8WUD6 406 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 CNOT9Q92600 299 aaKnown RBP10.75□□□□□ -0.69
USP53-201ENST00000274030 GTF2H4Q92759 462 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 PAPOLGQ9BWT3 736 aaKnown RBP10.75□□□□□ -0.69
USP53-201ENST00000274030 APMAPQ9HDC9 416 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 CBLCQ9ULV8 474 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 BRWD1Q9NSI6 2320 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 KIR2DS5A0A0G2JLQ3 304 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 A0A0G2JNG1 304 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 KIR2DS3K7RE56 304 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 DVL2O14641 736 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 HPGDSO60760 199 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 LILRB3O75022 631 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 S100PP25815 95 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 AGTR1P30556 359 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 APLNRP35414 380 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SLC6A8P48029 635 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 DAP3P51398 398 aaKnown RBP10.75□□□□□ -0.69
USP53-201ENST00000274030 CAV3P56539 151 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 RAB4BP61018 213 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 SLC7A9P82251 487 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 KEAP1Q14145 624 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 KIR2DS5Q14953 304 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 OR7E24Q6IFN5 339 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 ZFP90Q8TF47 636 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 TM9SF4Q92544 642 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 DHRS4Q9BTZ2 278 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 CLMPQ9H6B4 373 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 INIPQ9NRY2 104 aa10.75□□□□□ -0.69
USP53-201ENST00000274030 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ARPC1BO15143 372 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 CASC3O15234 703 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 APEHP13798 732 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 CD38P28907 300 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 LUMP51884 338 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 ZNF33BQ06732 778 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 OR1Q1Q15612 314 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 C3orf38Q5JPI3 329 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 VASNQ6EMK4 673 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 DESI1Q6ICB0 168 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 CD163Q86VB7 1156 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 GTPBP8Q8N3Z3 284 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 PGBD5Q8N414 524 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 OR4D6Q8NGJ1 314 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 DEDD2Q8WXF8 326 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 DCUN1D4Q92564 292 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 SENP5Q96HI0 755 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 CCDC163A0A0D9SF12 145 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 B8ZZF3 427 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 H0YGG7 62 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 MPPED1O15442 326 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 TFP02787 698 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 RAB3AP20336 220 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 HLA-DMAP28067 261 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 CSNK1A1P48729 337 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 CSNK1EP49674 416 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 ADARB1P78563 741 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 POU3F1Q03052 451 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 PDZD9Q8IXQ8 264 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 GDPD1Q8N9F7 314 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 FAM83FQ8NEG4 500 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 OR2A12Q8NGT7 310 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ACOT11Q8WXI4 607 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 NANOS1Q8WY41 292 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 TFAP2CQ92754 450 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ELMOD3Q96FG2 381 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 MED20Q9H944 212 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 DNAJB11Q9UBS4 358 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 PISDQ9UG56 409 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms