RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 NPIPB9F8W1W9 429 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ZNF195O14628 629 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 TNFSF11O14788 317 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 OIP5O43482 229 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ITM2AO43736 263 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 EFNA2O43921 213 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 CXCL13O43927 109 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 DIAPH2O60879 1101 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 SS18L1O75177 396 aaPredicted RBP8.7□□□□□ -1.02
VPS41-201ENST00000265745 SKAP2O75563 359 aaPredicted RBP8.7□□□□□ -1.02
VPS41-201ENST00000265745 PLGP00747 810 aaPredicted RBP8.7□□□□□ -1.02
VPS41-201ENST00000265745 KRT16P08779 473 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ATP6V1C1P21283 382 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ME2P23368 584 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ADH6P28332 368 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 EIF1P41567 113 aaKnown RBP8.7□□□□□ -1.02
VPS41-201ENST00000265745 ATP12AP54707 1039 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 CLDN8P56748 225 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 CARD18P57730 90 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 HBA1P69905 142 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ZNF117Q03924 483 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 TP53BP2Q13625 1128 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 SMU1Q2TAY7 513 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 SPDYE7PQ495Y7 208 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 DCST2Q5T1A1 773 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS41-201ENST00000265745 ANKRD34AQ69YU3 496 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 HBMQ6B0K9 141 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 CBLN3Q6UW01 205 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ZNF550Q7Z398 422 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 CXorf67Q86X51 503 aaPredicted RBP8.7□□□□□ -1.02
VPS41-201ENST00000265745 LILRA2Q8N149 483 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 MREGQ8N565 214 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ZNF527Q8NB42 609 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 OR6K3Q8NGY3 331 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 OR2V1Q8NHB1 315 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 PHOSPHO1Q8TCT1 267 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 SFXN5Q8TD22 340 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 DUSP26Q9BV47 211 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 TMEM185BQ9H7F4 350 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 GLRX2Q9NS18 164 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 BEX4Q9NWD9 120 aaPredicted RBP8.7□□□□□ -1.02
VPS41-201ENST00000265745 ASIC5Q9NY37 505 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ICAM5Q9UMF0 924 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 CLEC4AQ9UMR7 237 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 EMC9Q9Y3B6 208 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 ACTL7BQ9Y614 415 aa8.7□□□□□ -1.02
VPS41-201ENST00000265745 NPIPA5A0A0B4J1W7 369 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 WDR91A4D1P6 747 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 NPIPA7E9PJI5 369 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 H3BNH8 94 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 BIRC5O15392 142 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 CFLARO15519 480 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 SYNGR4O95473 234 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 SERPINE1P05121 402 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 NPIPA8P0DM63 369 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 NID1P14543 1247 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 ATF4P18848 351 aaPredicted RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 LOXP28300 417 aaPredicted RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 ELK4P28324 431 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 SHC1P29353 583 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 P2RX1P51575 399 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 SUMO3P55854 103 aaPredicted RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 CTBP2P56545 445 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 NKX6-1P78426 367 aaPredicted RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 ZNF844Q08AG5 666 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 FOXF1Q12946 379 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 MAD2L1Q13257 205 aaPredicted RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 TOMM34Q15785 309 aaPredicted RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 EXOC3L2Q2M3D2 409 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 PGS1Q32NB8 556 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 PDSS1Q5T2R2 415 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 GTF2IRD2BQ6EKJ0 949 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 PPP4R4Q6NUP7 873 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 BHLHB9Q6PI77 547 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 STAC2Q6ZMT1 411 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 C6orf120Q7Z4R8 191 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 GTF2IRD2Q86UP8 949 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 KRTAP1-3Q8IUG1 177 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 OR5AK3PQ8NH89 298 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 FBXO27Q8NI29 283 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 PPP1R14CQ8TAE6 165 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 GPR119Q8TDV5 335 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 MOAP1Q96BY2 351 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 ZNF524Q96C55 264 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 PIK3IP1Q96FE7 263 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 PKNOX2Q96KN3 472 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 KLHL15Q96M94 604 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 ZIM3Q96PE6 472 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 OR7D2Q96RA2 312 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 KLHL4Q9C0H6 718 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 C20orf27Q9GZN8 174 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 GSX1Q9H4S2 264 aaPredicted RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 AKTIPQ9H8T0 292 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 SSU72Q9NP77 194 aaKnown RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 NOP53Q9NZM5 478 aaKnown RBP8.69□□□□□ -1.02
VPS41-201ENST00000265745 CARD8Q9Y2G2 431 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 DTNAQ9Y4J8 743 aa8.69□□□□□ -1.02
VPS41-201ENST00000265745 DOCK7Q96N67 2140 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms