RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SOSTQ9BQB4 213 aa11.53□□□□□ -0.56
CHMP3-201ENST00000263856 ZNF559Q9BR84 538 aa11.53□□□□□ -0.56
CHMP3-201ENST00000263856 PIGUQ9H490 435 aa11.53□□□□□ -0.56
CHMP3-201ENST00000263856 SLC6A20Q9NP91 592 aa11.53□□□□□ -0.56
CHMP3-201ENST00000263856 ISYNA1Q9NPH2 558 aa11.53□□□□□ -0.56
CHMP3-201ENST00000263856 MRPS18AQ9NVS2 196 aaKnown RBP11.53□□□□□ -0.56
CHMP3-201ENST00000263856 FBXO34Q9NWN3 711 aa11.53□□□□□ -0.56
CHMP3-201ENST00000263856 APOBEC3BQ9UH17 382 aaKnown RBP11.53□□□□□ -0.56
CHMP3-201ENST00000263856 EDDM13A0A1B0GTR0 161 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 FAM86C2PA6NEL3 165 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ADH1CP00326 375 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 PTHLHP12272 177 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 F3P13726 295 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 RAB3BP20337 219 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ENPP1P22413 925 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 CTNNB1P35222 781 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 PSMB10P40306 273 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 CLDN12P56749 244 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 CRMP1Q14194 572 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ZBTB37Q5TC79 503 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 FAAP20Q6NZ36 180 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 SLC48A1Q6P1K1 146 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 MEPCEQ7L2J0 689 aaKnown RBP11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ABHD4Q8TB40 342 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 C1QTNF6Q9BXI9 259 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ACTRT3Q9BYD9 372 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 SLC25A18Q9H1K4 315 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 FN3KQ9H479 309 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 PRDM7Q9NQW5 492 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 SIDT1Q9NXL6 827 aaKnown RBP11.52□□□□□ -0.57
CHMP3-201ENST00000263856 OR6C2Q9NZP2 312 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 RANBP2P49792 3224 aaKnown RBP11.52□□□□□ -0.57
CHMP3-201ENST00000263856 LDB3O75112 727 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 SLC22A5O76082 557 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 CISD3P0C7P0 127 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF888P0CJ79 500 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-201ENST00000263856 F8A1P23610 371 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ITGB8P26012 769 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 NOGQ13253 232 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ANGPT1Q15389 498 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 DUSP5Q16690 384 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 GXYLT1Q4G148 440 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 HES5Q5TA89 166 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 WDR88Q6ZMY6 472 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 TRILQ7L0X0 811 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF527Q8NB42 609 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 OR2T35Q8NGX2 323 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 GHSRQ92847 366 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ARHGDIGQ99819 225 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 C11orf49Q9H6J7 331 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 KRCC1Q9NPI7 259 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-201ENST00000263856 CYSLTR2Q9NS75 346 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 ASB6Q9NWX5 421 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 GLTPQ9NZD2 209 aa11.52□□□□□ -0.57
CHMP3-201ENST00000263856 A0A1W2PP55 124 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 C1QTNF3-AMACRE9PGA6 284 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 MTNR1BP49286 362 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 PER3P56645 1201 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 MAPK14Q16539 360 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 TRMT12Q53H54 448 aaKnown RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 PXDC1Q5TGL8 231 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 PSRC1Q6PGN9 363 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 FRRS1Q6ZNA5 592 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SSX6Q7RTT6 188 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 COMMD7Q86VX2 200 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 CDK20Q8IZL9 346 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SLC44A3Q8N4M1 653 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 BMPERQ8N8U9 685 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 FAM98AQ8NCA5 519 aaKnown RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 OR2L5Q8NG80 312 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 OR10G6Q8NH81 332 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 ACOT12Q8WYK0 555 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 RELTQ969Z4 430 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 RSPRY1Q96DX4 576 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 OR10A4Q9H209 315 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SATB2Q9UPW6 733 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 INSL6Q9Y581 213 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 F5P12259 2224 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 FAM171A2A8MVW0 826 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 DNAJB6O75190 326 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 GATBO75879 557 aaKnown RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 H2AFB2P0C5Z0 115 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 NT5EP21589 574 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SNTB2Q13425 540 aaKnown RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 ARHGAP19Q14CB8 494 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 DECR1Q16698 335 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 PLA1AQ53H76 456 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 OAFQ86UD1 273 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 RANBP3LQ86VV4 465 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 GID4Q8IVV7 300 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 GJD3Q8N144 294 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 OR4C6Q8NH72 309 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 TMEM239Q8WW34 195 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SMPDL3BQ92485 455 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 PEX11GQ96HA9 241 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms