RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ACSS1Q9NUB1 689 aaPredicted RBP13.95□□□□□ -0.18
XRCC1-201ENST00000262887 SLC25A13Q9UJS0 675 aa13.95□□□□□ -0.18
XRCC1-201ENST00000262887 DNASE2O00115 360 aaPredicted RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 PLPP2O43688 288 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ITGA10O75578 1167 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 SERPIND1P05546 499 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 SAGP10523 405 aaPredicted RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 PTGER1P34995 402 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 CCR9P51686 369 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 PSMA6P60900 246 aaKnown RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 E2F1Q01094 437 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 LASP1Q14847 261 aaKnown RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 LTB4RQ15722 352 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ZNF311Q5JNZ3 666 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 SLC25A25Q6KCM7 469 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 PXKQ7Z7A4 578 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 NKAIN4Q8IVV8 208 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 NRMQ8IXM6 262 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 CMTM8Q8IZV2 173 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 RGMAQ96B86 450 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 NDC1Q9BTX1 674 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ZCCHC2Q9C0B9 1178 aaKnown RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 GLIPR2Q9H4G4 154 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ABRACLQ9P1F3 81 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 RCE1Q9Y256 329 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ARPC1BO15143 372 aaKnown RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 CTDSPLO15194 276 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 S100A6P06703 90 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ATF1P18846 271 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 RAD52P43351 418 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 SIM1P81133 766 aaPredicted RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 CORO6Q6QEF8 472 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 CDH26Q8IXH8 852 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 IZUMO1Q8IYV9 350 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 MEIOBQ8N635 442 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ZNF454Q8N9F8 522 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ZNF461Q8TAF7 563 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ZNF689Q96CS4 500 aaPredicted RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 SAMD8Q96LT4 415 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 MED20Q9H944 212 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 HRASLSQ9HDD0 168 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 ZNF69Q9UC07 566 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 GPR160Q9UJ42 338 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 GPR55Q9Y2T6 319 aaPredicted RBP13.94□□□□□ -0.18
XRCC1-201ENST00000262887 PRKAB1Q9Y478 270 aa13.94□□□□□ -0.18
XRCC1-201ENST00000262887 TMPRSS11DO60235 418 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 GALR3O60755 368 aaPredicted RBP13.93□□□□□ -0.18
XRCC1-201ENST00000262887 GATBO75879 557 aaKnown RBP13.93□□□□□ -0.18
XRCC1-201ENST00000262887 APOC1P02654 83 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 MT-ND5P03915 603 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 CPN1P15169 458 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 NDUFV2P19404 249 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 PTNP21246 168 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 TRHRP34981 398 aaPredicted RBP13.93□□□□□ -0.18
XRCC1-201ENST00000262887 ACVR1BP36896 505 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 CRHR2Q13324 411 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 MPP7Q5T2T1 576 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 OR5M10Q6IEU7 315 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 FAM129CQ86XR2 697 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 PDZD9Q8IXQ8 264 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 EIF4E3Q8N5X7 224 aaKnown RBP13.93□□□□□ -0.18
XRCC1-201ENST00000262887 ACOT11Q8WXI4 607 aaPredicted RBP13.93□□□□□ -0.18
XRCC1-201ENST00000262887 MS4A8Q9BY19 250 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 LRFN2Q9ULH4 789 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 A0A0G2JPF8 293 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 HNRNPCL3B7ZW38 293 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 PIP5K1CO60331 668 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 CKMP06732 381 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 HNRNPCL4P0DMR1 293 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 TYRP14679 529 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 ACSM3Q53FZ2 586 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 TMEM255AQ5JRV8 349 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 NIPAL3Q6P499 406 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 GLDNQ6ZMI3 551 aaPredicted RBP13.93□□□□□ -0.18
XRCC1-201ENST00000262887 NUDT13Q86X67 352 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 TRAPPC5Q8IUR0 188 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 NAXDQ8IW45 347 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 OR6V1Q8N148 313 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 C17orf47Q8NEP4 570 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 OR1S1Q8NH92 325 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 ASB12Q8WXK4 309 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 NR4A3Q92570 626 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 PLAGL1Q9UM63 463 aa13.93□□□□□ -0.18
XRCC1-201ENST00000262887 NUP210Q8TEM1 1887 aaPredicted RBP13.93□□□□□ -0.18
XRCC1-201ENST00000262887 OR2M5A3KFT3 312 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 D6RAR5 112 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 ABCD4O14678 606 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 SELENOFO60613 162 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 OLFM2O95897 454 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 IFNGR1P15260 489 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 PPP3CBP16298 524 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 GJA1P17302 382 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 NCBP2P52298 156 aaKnown RBP eCLIP13.92□□□□□ -0.18
XRCC1-201ENST00000262887 SEC61A1P61619 476 aaKnown RBP13.92□□□□□ -0.18
XRCC1-201ENST00000262887 STXBP1P61764 594 aaKnown RBP13.92□□□□□ -0.18
XRCC1-201ENST00000262887 GK2Q14410 553 aaPredicted RBP13.92□□□□□ -0.18
XRCC1-201ENST00000262887 MAPK14Q16539 360 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 TMUB2Q71RG4 321 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 VRK2Q86Y07 508 aa13.92□□□□□ -0.18
XRCC1-201ENST00000262887 SLC44A3Q8N4M1 653 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms