RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 WDSUB1Q8N9V3 476 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 OR51I1Q9H343 314 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 UBQLN3Q9H347 655 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 SCO2O43819 266 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 SLC19A2O60779 497 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 STSP08842 583 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 PTPN6P29350 595 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 TRPC1P48995 793 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 SLC36A3Q495N2 470 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ZAR1Q86SH2 424 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 OR4C3Q8NH37 302 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 GTF2H4Q92759 462 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 PHF12Q96QT6 1004 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 LDAHQ9H6V9 325 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ACKR4Q9NPB9 350 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 SDHAF3Q9NRP4 125 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 SLC6A13Q9NSD5 602 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ZNF835Q9Y2P0 537 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 DLGAP1O14490 977 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 ZNHIT1O43257 154 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 CBR3O75828 277 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 TRAPPC6AO75865 159 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 AGR2O95994 175 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 C1QCP02747 245 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 NGFRP08138 427 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 TBXA2RP21731 343 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 CDH15P55291 814 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 CYP51A1Q16850 503 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 TNFAIP8L2Q6P589 184 aaPredicted RBP15.27■□□□□ 0.04
SDCBP-201ENST00000260130 DHRS4L2Q6PKH6 230 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 SLC2A7Q6PXP3 512 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 DNAJC14Q6Y2X3 702 aaPredicted RBP15.27■□□□□ 0.04
SDCBP-201ENST00000260130 TRILQ7L0X0 811 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 FGD2Q7Z6J4 655 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 MARCH3Q86UD3 253 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 PLCZ1Q86YW0 608 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 KCTD14Q9BQ13 255 aaPredicted RBP15.27■□□□□ 0.04
SDCBP-201ENST00000260130 TBL1XR1Q9BZK7 514 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 ALG2Q9H553 416 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 SLC52A3Q9NQ40 469 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 UBQLN4Q9NRR5 601 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 EXD2Q9NVH0 621 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 GALNT8Q9NY28 637 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 LIPGQ9Y5X9 500 aa15.27■□□□□ 0.04
SDCBP-201ENST00000260130 POLEQ07864 2286 aa15.27■□□□□ 0.03
SDCBP-201ENST00000260130 NINQ8N4C6 2090 aa15.27■□□□□ 0.03
SDCBP-201ENST00000260130 A0A1B0GVC2 190 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 TRIM64A6NGJ6 449 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 ADAM10O14672 748 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 SUSD5O60279 629 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 TPST1O60507 370 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 OR12D1P0DN82 309 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 ABOP16442 354 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 TTKP33981 857 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 PTGS2P35354 604 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 EEFSECP57772 596 aaKnown RBP15.26■□□□□ 0.03
SDCBP-201ENST00000260130 ESPL1Q14674 2120 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 OR5M10Q6IEU7 315 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 APOOLQ6UXV4 268 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 RNF130Q86XS8 419 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 CHDHQ8NE62 594 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-201ENST00000260130 RNF217Q8TC41 542 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 XAGE5Q8WWM1 108 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 SDF2Q99470 211 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 RTN4RQ9BZR6 473 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 LEF1Q9UJU2 399 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-201ENST00000260130 OAZ3Q9UMX2 235 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 TRGV5A0A0B4J1U4 118 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 HCN1O60741 890 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 KRT75O95678 551 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 OXSR1O95747 527 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-201ENST00000260130 AK1P00568 194 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 HPNP05981 417 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 GNAO1P09471 354 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 GSK3BP49841 420 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 KHKP50053 298 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 TOMM20Q15388 145 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 ARHGAP11BQ3KRB8 267 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 Q6ZPB1 254 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-201ENST00000260130 EGFL6Q8IUX8 553 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 CROCCP3Q8IVE0 287 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 PAPD5Q8NDF8 572 aaKnown RBP15.26■□□□□ 0.03
SDCBP-201ENST00000260130 ZFP90Q8TF47 636 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 DUSP19Q8WTR2 217 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 CYGBQ8WWM9 190 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 RAB8BQ92930 207 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 PPP4R1LQ9P1A2 415 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 HRH3Q9Y5N1 445 aa15.26■□□□□ 0.03
SDCBP-201ENST00000260130 ALG1L2C9J202 215 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 CLOCKO15516 846 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 NPPAP01160 153 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 HPGDP15428 266 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 SRSF1Q07955 248 aaKnown RBP eCLIP15.25■□□□□ 0.03
SDCBP-201ENST00000260130 ATAD3BQ5T9A4 648 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 HEPHL1Q6MZM0 1159 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 CLVS1Q8IUQ0 354 aaPredicted RBP15.25■□□□□ 0.03
SDCBP-201ENST00000260130 DHRSXQ8N5I4 330 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 HOXD1Q9GZZ0 328 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 PAIP1Q9H074 479 aaKnown RBP15.25■□□□□ 0.03
SDCBP-201ENST00000260130 EXO5Q9H790 373 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms