RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SLC25A32Q9H2D1 315 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 NSUN3Q9H649 340 aaKnown RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RNF6Q9Y252 685 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 THSD7AQ9UPZ6 1657 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RIC1Q4ADV7 1423 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 FBLL1A6NHQ2 334 aaKnown RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 SPATA31C2B4DYI2 1134 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF587BE7ETH6 402 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 H3BNC9 293 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 HRKO00198 91 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 PLRG1O43660 514 aaKnown RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 MMP1P03956 469 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 CALCBP10092 127 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 ADCYAP1P18509 176 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 EPHA1P21709 976 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 NFYBP25208 207 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RPL14P50914 215 aaKnown RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RPS8P62241 208 aaKnown RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 CD47Q08722 323 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 OR4D1Q15615 310 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 KIAA0930Q6ICG6 404 aaPredicted RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 CHST9Q7L1S5 443 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 LYG2Q86SG7 212 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 OR5L1Q8NGL2 311 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 OR52J3Q8NH60 311 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 GPR151Q8TDV0 419 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RLN3Q8WXF3 142 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 GHSRQ92847 366 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RAB1CQ92928 201 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 CCDC74AQ96AQ1 378 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 SPSB1Q96BD6 273 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RASD2Q96D21 266 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 ALG14Q96F25 216 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 OR2M4Q96R27 311 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM43Q9BTV4 400 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 FGFBP2Q9BYJ0 223 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 BCO2Q9BYV7 579 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 IGFLR1Q9H665 355 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 SMURF2Q9HAU4 748 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 XPNPEP3Q9NQH7 507 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 C1orf109Q9NX04 203 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 VNN3Q9NY84 501 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 SEMA5BQ9P283 1151 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 WNT16Q9UBV4 365 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 PPT2Q9UMR5 302 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 BCS1LQ9Y276 419 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 C4AP0C0L4 1744 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 C4BP0C0L5 1744 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 RAMP3O60896 148 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 TXNDC12O95881 172 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 C1QCP02747 245 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 IL6RP08887 468 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CSH1P0DML2 217 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CSH2P0DML3 217 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 BCKDHBP21953 392 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 GADD45AP24522 165 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ID1P41134 155 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ARF3P61204 181 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ARF1P84077 181 aaKnown RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 DMWDQ09019 674 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CDH18Q13634 790 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SIRPB2Q5JXA9 342 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 AKR1C8PQ5T2L2 129 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 GCNT6Q5T4J0 391 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CD276Q5ZPR3 534 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 NSUN5P2Q63ZY6 315 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 APOBEC3HQ6NTF7 200 aaKnown RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM270Q6UE05 265 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ABHD12BQ7Z5M8 362 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 RBM45Q8IUH3 476 aaKnown RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 KLHDC8BQ8IXV7 354 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ADGRF3Q8IZF5 1079 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 C1orf127Q8N9H9 656 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CD99L2Q8TCZ2 262 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CNOT9Q92600 299 aaKnown RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ANAPC16Q96DE5 110 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 FAM110AQ9BQ89 295 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MRPL4Q9BYD3 311 aaKnown RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SLC38A1Q9H2H9 487 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MSL2Q9HCI7 577 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MMP25Q9NPA2 562 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CBLN4Q9NTU7 201 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MTMR10Q9NXD2 777 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 P4HTMQ9NXG6 502 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MTCH1Q9NZJ7 389 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF230Q9UIE0 474 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 PKP3Q9Y446 797 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 PLCH1Q4KWH8 1693 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 DHRS12A0PJE2 317 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF705EA8MWA4 302 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SEC14L6B5MCN3 397 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 C5orf58C9J3I9 102 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ANKRD28O15084 1053 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MOSPD3O75425 235 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 FADS2O95864 444 aaKnown RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 EPXP11678 715 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 KCNE1P15382 129 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SHC1P29353 583 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ELK3P41970 407 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CDK8P49336 464 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms