RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PXYLP1Q8TE99 480 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CPB2Q96IY4 423 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 C12orf42Q96LP6 360 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM43Q9BTV4 400 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 OR14J1Q9UGF5 321 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 STRAPQ9Y3F4 350 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 A6NLC8 198 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 FMO6PO60774 539 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 USP2O75604 605 aaPredicted RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 LEFTY1O75610 366 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ZFPL1O95159 310 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GLUD1P00367 558 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TCRBP04435 133 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GALTP07902 379 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 HOXB8P17481 243 aaPredicted RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 AGXTP21549 392 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 PCSK1P29120 753 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CASRP41180 1078 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NPRL3Q12980 569 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 MANEAQ5SRI9 462 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GCNT6Q5T4J0 391 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NADSYN1Q6IA69 706 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2T5Q6IEZ7 315 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SV2AQ7L0J3 742 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NDUFAF7Q7L592 441 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 FRMD1Q8N878 549 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2T29Q8NH02 315 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NT5C3BQ969T7 300 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 LMLNQ96KR4 655 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 HSD17B14Q9BPX1 270 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 UBR2Q8IWV8 1755 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 MOXD2PA6NHM9 499 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SGPL1O95470 568 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CDS2O95674 445 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 LPLP06858 475 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CD3GP09693 182 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SPATA31C1P0DKV0 1188 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 OR8G3PP0DMU2 310 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 INSRRP14616 1297 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 AKR1C3P42330 323 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 PPP3CAQ08209 521 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 PROX2Q3B8N5 592 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SPRED1Q7Z699 444 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SCN4BQ8IWT1 228 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF100Q8IYN0 542 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 MCOLN2Q8IZK6 566 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NEIL3Q8TAT5 605 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 OR1F2PQ96R84 312 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NGBQ9NPG2 151 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ACP6Q9NPH0 428 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 KCND3Q9UK17 655 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SMIM30A4D0T7 59 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ACKR2O00590 384 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GUSBP08236 651 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 OR10J1P30954 320 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 AQP2P41181 271 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CDX1P47902 265 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SPHARQ15513 63 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TREML2Q5T2D2 321 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SAXO2Q658L1 398 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ENPP7Q6UWV6 458 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CHTF18Q8WVB6 975 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SENP5Q96HI0 755 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 HBEGFQ99075 208 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SCUBE2Q9NQ36 999 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ANKRD28O15084 1053 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ANXA9O76027 345 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 LGALS2P05162 132 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 EBLN1P0CF75 366 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 HOXD8P13378 290 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 RABIFP47224 123 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SCAND1P57086 179 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TCEA2Q15560 299 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2G6Q5TZ20 316 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM198Q66K66 360 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MFSD7Q6UXD7 560 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GRINAQ7Z429 371 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 LAX1Q8IWV1 398 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 NKAPQ8N5F7 415 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GRHL3Q8TE85 626 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 FGGYQ96C11 551 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 EPYCQ99645 322 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GPR88Q9GZN0 384 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MBNL1Q9NR56 388 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 DTX4Q9Y2E6 619 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MARF1Q9Y4F3 1742 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ASTN1O14525 1302 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TGIF2-C20orf24A0A0A6YYL0 155 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TCRBV16S1A1N1A0A5B0 115 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 FAM166BA8MTA8 275 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 TGM5O43548 720 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 GCGP01275 180 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 VTNP04004 478 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 THP07101 528 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 ENGP17813 658 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 MMP11P24347 488 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CD34P28906 385 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 DAOAP59103 153 aa6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 CSNK2A1P68400 391 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-201ENST00000257290 SCAPQ12770 1279 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms