RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CA5AP35218 305 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 CSNK1A1P48729 337 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 PRLHRP49683 370 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 SLC7A9P82251 487 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 OR1Q1Q15612 314 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 ASB11Q8WXH4 323 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 NANOS1Q8WY41 292 aaKnown RBP17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 CAMLGP49069 296 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 MGAT3Q09327 533 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 FGL2Q14314 439 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 SMN1Q16637 294 aaKnown RBP17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 ISG20Q96AZ6 181 aaKnown RBP17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 CDCA3Q99618 268 aaPredicted RBP17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 OR52D1Q9H346 318 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 AIFM1O95831 613 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 CRABP1P29762 137 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 POU3F1Q03052 451 aaPredicted RBP17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 LRRC26Q2I0M4 334 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 UNQ6126/PRO20091Q6UXV3 157 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 ADGRG5Q8IZF4 528 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 TMIEQ8NEW7 156 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 CSNK1G1Q9HCP0 422 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 DHCR7Q9UBM7 475 aaKnown RBP17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 USP3Q9Y6I4 520 aa17.52■□□□□ 0.39
SMARCC1-201ENST00000254480 CHD4Q14839 1912 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 HSPB6O14558 160 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 LILRB3O75022 631 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 SERPINA2P20848 420 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 C21orf33P30042 268 aaPredicted RBP17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 NOVP48745 357 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 DAP3P51398 398 aaKnown RBP17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 GLO1Q04760 184 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ZNF750Q32MQ0 723 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 CD163Q86VB7 1156 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 CPT1CQ8TCG5 803 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 AGPAT2O15120 278 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 LRRTM2O43300 516 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 PEX14O75381 377 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ZNF14P17017 642 aaPredicted RBP17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 PRSS3P35030 304 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 OR7E24Q6IFN5 339 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 OR51Q1Q8NH59 317 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 NTMT1Q9BV86 223 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 LRRC37A3O60309 1634 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ARPC5O15511 151 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 PRKYO43930 277 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 HPGDSO60760 199 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 TNFRSF4P43489 277 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 RAB4BP61018 213 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ATOH8Q96SQ7 321 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 INTS14Q96SY0 518 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 PLEKHA3Q9HB20 300 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ARID1BQ8NFD5 2236 aaPredicted RBP17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 NSG1A0A0A6YYJ2 146 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 KIR2DS5A0A0G2JLQ3 304 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 A0A0G2JNG1 304 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 KIR2DS3K7RE56 304 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 TACR1P25103 407 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 GCAP28676 217 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ADARB1P78563 741 aaKnown RBP17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 KIR2DS5Q14953 304 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ACSM3Q53FZ2 586 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 VRK3Q8IV63 474 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 INIPQ9NRY2 104 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ANKRD10Q9NXR5 420 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 WASH4PA8MWX3 477 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 F3P13726 295 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 NFATC4Q14934 902 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 PROX2Q3B8N5 592 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 KRBOX4Q5JUW0 171 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 PPP1R3BQ86XI6 285 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ZNF740Q8NDX6 193 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 ABHD11Q8NFV4 315 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 CUTCQ9NTM9 273 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 HAO2Q9NYQ3 351 aa17.51■□□□□ 0.39
SMARCC1-201ENST00000254480 CPMP14384 443 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 RAB3AP20336 220 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 HTR2BP41595 481 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 FAM111BQ6SJ93 734 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 ZNF534Q76KX8 674 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 H3BMQ9 156 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PPP5CP53041 499 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 ANKRD54Q6NXT1 300 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 COG8Q96MW5 612 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 INTS6Q9UL03 887 aaKnown RBP17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PLEKHM1Q9Y4G2 1056 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PCDHGA8Q9Y5G5 932 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 HSPE1-MOB4S4R3N1 261 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PXKQ7Z7A4 578 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 OR13C2Q8NGS9 318 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PIGCQ92535 297 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 C2orf72A6NCS6 295 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PLCXD3Q63HM9 321 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 ZNF695Q8IW36 515 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 GCDHQ92947 438 aaPredicted RBP17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PRRC1Q96M27 445 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 FAM53CQ9NYF3 392 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 BCAT2O15382 392 aaPredicted RBP17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 BCAS1O75363 584 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms