RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SECISBP2Q96T21 854 aaKnown RBP9.4□□□□□ -0.91
COPB1-201ENST00000249923 MCHR1Q99705 422 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 KCNJ15Q99712 375 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 ZMIZ1Q9ULJ6 1067 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 MGAT4AQ9UM21 535 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 RABL2BQ9UNT1 228 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 COL4A2P08572 1712 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 GPR89AB7ZAQ6 455 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 BHLHE40O14503 412 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SLC30A4O14863 429 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 EEF1E1O43324 174 aaKnown RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 GATBO75879 557 aaKnown RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 GPR89BP0CG08 455 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 CLUP10909 449 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 MPIP34949 423 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ARFIP1P53367 373 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ST3GAL3Q11203 375 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SRSF5Q13243 272 aaKnown RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 GDPD1Q8N9F7 314 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 FGF14Q92915 247 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 KXD1Q9BQD3 176 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 DPH1Q9BZG8 443 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 TRPV4Q9HBA0 871 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 EXOSC1Q9Y3B2 195 aaKnown RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 EML5Q05BV3 1969 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 HMX3A6NHT5 357 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 PROS1P07225 676 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 CA3P07451 260 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 TEAD1P28347 426 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 NOS3P29474 1203 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 HTR1FP30939 366 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 THBS2P35442 1172 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 EVX1P49640 407 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ARHGDIBP52566 201 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 RGS8P57771 180 aaPredicted RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 FHL1Q13642 323 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 FCRLBQ6BAA4 426 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 IZUMO1Q8IYV9 350 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 VWA5B2Q8N398 1253 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 OR51G2Q8NGK0 314 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 OR2A5Q96R48 311 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SNX18Q96RF0 628 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SLC17A9Q9BYT1 436 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 TWSG1Q9GZX9 223 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 NARFLQ9H6Q4 476 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 NUDT15Q9NV35 164 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ING4Q9UNL4 249 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SPAG17Q6Q759 2223 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 TRBV23OR9-2A0A075B6M9 112 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ZNF860A6NHJ4 632 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 FABP7O15540 132 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 HCRTR1O43613 425 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 PLRG1O43660 514 aaKnown RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 KDM4BO94953 1096 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SMIM10L1P0DMW3 83 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 COL9A1P20849 921 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 GCGRP47871 477 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ADPRHP54922 357 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ACSM1Q08AH1 577 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 FAPQ12884 760 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 MAB21L1Q13394 359 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ANGPT1Q15389 498 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 DEFB134Q4QY38 66 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 FAAH2Q6GMR7 532 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 PLBD1Q6P4A8 553 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 NEIL3Q8TAT5 605 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 PIGXQ8TBF5 258 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ZCCHC10Q8TBK6 192 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 AKAP1Q92667 903 aaKnown RBP eCLIP9.39□□□□□ -0.91
COPB1-201ENST00000249923 PTP4A1Q93096 173 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SMIM10Q96HG1 83 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SDF2Q99470 211 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 APOOQ9BUR5 198 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 ABCG5Q9H222 651 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 PHPT1Q9NRX4 125 aaPredicted RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 FBXO9Q9UK97 447 aaPredicted RBP9.39□□□□□ -0.91
COPB1-201ENST00000249923 LRP4O75096 1905 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 TICRRQ7Z2Z1 1910 aa9.39□□□□□ -0.91
COPB1-201ENST00000249923 SLC31A1O15431 190 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 ORC5O43913 435 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 CTSBP07858 339 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 C5AR1P21730 350 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 RPS4Y1P22090 263 aaKnown RBP9.38□□□□□ -0.91
COPB1-201ENST00000249923 RPS5P46782 204 aaKnown RBP9.38□□□□□ -0.91
COPB1-201ENST00000249923 VSX2P58304 361 aaPredicted RBP9.38□□□□□ -0.91
COPB1-201ENST00000249923 AKIRIN2Q53H80 203 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 FCRL6Q6DN72 434 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 NIPAL3Q6P499 406 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 ZNF613Q6PF04 617 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 NRROSQ86YC3 692 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 C17orf47Q8NEP4 570 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 OR1E3Q8WZA6 343 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 MOAP1Q96BY2 351 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 TM4SF19Q96DZ7 209 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 SLC38A2Q96QD8 506 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 OR51V1Q9H2C8 321 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 ANKRD19PQ9H560 264 aa9.38□□□□□ -0.91
COPB1-201ENST00000249923 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
COPB1-201ENST00000249923 MEPEQ9NQ76 525 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms