RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DRD5P21918 477 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 PAICSP22234 425 aaKnown RBP18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 RAB38P57729 211 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 PSG6Q00889 435 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 FOXK2Q01167 660 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 SCN1BQ07699 218 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 C1orf61Q13536 156 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 AMZ1Q400G9 498 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 PDZK1Q5T2W1 519 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 FCRLBQ6BAA4 426 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 TAF8Q7Z7C8 310 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 VWA5B2Q8N398 1253 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 ACBD7Q8N6N7 88 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 NLGN4YQ8NFZ3 816 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 HOXB13Q92826 284 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 ART5Q96L15 291 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 ATF6BQ99941 703 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 FLRT3Q9NZU0 649 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 KIR2DS5A0A0G2JLQ3 304 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 A0A0G2JNG1 304 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 SYNDIG1LA6NDD5 238 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR5K3A6NET4 321 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 PRAMEF26H0Y7S4 382 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 KIR2DS3K7RE56 304 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 SAGP10523 405 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 KIR2DS5Q14953 304 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 RAB30Q15771 203 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 ARHGEF39Q8N4T4 335 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF614Q8N883 585 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 GDPD1Q8N9F7 314 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR4N2Q8NGD1 307 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 PTCHD1Q96NR3 888 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 COQ7Q99807 217 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 ALG8Q9BVK2 526 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 IFT27Q9BW83 186 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 MMP17Q9ULZ9 603 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 MED31Q9Y3C7 131 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 HPGDSO60760 199 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 CCNKO75909 580 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLC35E2P0CK97 266 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 GAAP10253 952 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 S1PR1P21453 382 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 BMP8BP34820 402 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 EMDP50402 254 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 DAB2P98082 770 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 CSTF1Q05048 431 aaKnown RBP18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 ASAH1Q13510 395 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 KLHL12Q53G59 568 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 PYDC2Q56P42 97 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF362Q5T0B9 420 aaPredicted RBP18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF517Q6ZMY9 492 aaPredicted RBP18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 BMP8AQ7Z5Y6 402 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLC37A3Q8NCC5 494 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 CMC2Q9NRP2 79 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 ASB6Q9NWX5 421 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 USP36Q9P275 1121 aaKnown RBP18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 GRIP1Q9Y3R0 1128 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLCO1B1Q9Y6L6 691 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 SPTBP11277 2137 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 A0A0B4J2E0 115 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 A0A1B0GX12 115 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 SHISA7A6NL88 538 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 SEC14L5O43304 696 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 REM1O75628 298 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 RCBTB2O95199 551 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 IGKV1D-16P01601 117 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 IL9P15248 144 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 NOS3P29474 1203 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 NR4A2P43354 598 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 HHEXQ03014 270 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 FZD2Q14332 565 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF613Q6PF04 617 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 OOSP2Q86WS3 158 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR51A7Q8NH64 312 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 SENP5Q96HI0 755 aaPredicted RBP18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 RNF32Q9H0A6 362 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 MMP28Q9H239 520 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 NPAP1Q9NZP6 1156 aa18.06■□□□□ 0.48
CDC42EP1-201ENST00000249014 TRIOO75962 3097 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 SPTY2D1-AS1A0A0U1RR47 76 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR5K4A6NMS3 321 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 TGFBR3LH3BV60 316 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 HRKO00198 91 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 RNF13O43567 381 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR10H2O60403 315 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 IFI6P09912 130 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 CLUP10909 449 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 APEX1P27695 318 aaKnown RBP18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 CTBP2P56545 445 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 PPP3R1P63098 170 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 CCINQ13939 588 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 CDK20Q8IZL9 346 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF559Q9BR84 538 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 C11orf54Q9H0W9 315 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 C8orf33Q9H7E9 229 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 TMEM27Q9HBJ8 222 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 POLE3Q9NRF9 147 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 BABAM2Q9NXR7 383 aa18.05■□□□□ 0.48
CDC42EP1-201ENST00000249014 POLHQ9Y253 713 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms