RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 RSPH9Q9H1X1 276 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 STMN3Q9NZ72 180 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 OR6C2Q9NZP2 312 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 CBLCQ9ULV8 474 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 CHST2Q9Y4C5 530 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ASCC3Q8N3C0 2202 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 A0A1B0GVT2 93 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 SHISA3A0PJX4 238 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 GXYLT2A0PJZ3 443 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 SGK494L7N484 410 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 CD3GP09693 182 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ZNF3P17036 446 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ACSL1P33121 698 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 STX4Q12846 297 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ILF3Q12906 894 aaKnown RBP eCLIP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 SRSF5Q13243 272 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 CDK10Q15131 360 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ZIC1Q15915 447 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 C1orf53Q5VUE5 145 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 MRM1Q6IN84 353 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ABHD13Q7L211 337 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 MEPCEQ7L2J0 689 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 OR52E2Q8NGJ4 325 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 MSLNLQ96KJ4 702 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ARHGDIGQ99819 225 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ATF6BQ99941 703 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 C1QTNF2Q9BXJ5 285 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 B3GAT2Q9NPZ5 323 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 IL20Q9NYY1 176 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 PLXNA2O75051 1894 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 A0A0B4J203 849 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 KDM4EB2RXH2 506 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 PRKNO60260 465 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 HCN1O60741 890 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 CTSVO60911 334 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ZIC2O95409 532 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 AGR2O95994 175 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 RPS5P46782 204 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 POU6F2P78424 691 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 ZNHIT3Q15649 155 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 AADACL4Q5VUY2 407 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 SAMD14Q8IZD0 417 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 LRRC17Q8N6Y2 441 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 RFT1Q96AA3 541 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 LMAN2LQ9H0V9 348 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 IRF2BPLQ9H1B7 796 aa11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 MRPS2Q9Y399 296 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-201ENST00000247833 OR2W5A6NFC9 320 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 FGF17O60258 216 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 HTR2BP41595 481 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 SRP9P49458 86 aaKnown RBP11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 EVX1P49640 407 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 E2F1Q01094 437 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 ZNF619Q8N2I2 560 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 OR4M1Q8NGD0 313 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 OR8H1Q8NGG4 311 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 TRMT10AQ8TBZ6 339 aaKnown RBP11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 CHAC2Q8WUX2 184 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 CD93Q9NPY3 652 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 NUDT15Q9NV35 164 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 NPAP1Q9NZP6 1156 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 GNG8Q9UK08 70 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 LRRN3E7EW58 273 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 E9PI62 339 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 H0YGG7 62 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 RDH16O75452 317 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 IFNGP01579 166 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 HPGDP15428 266 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 NTSR1P30989 418 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 CENPAP49450 140 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 ADPRHP54922 357 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 ARF3P61204 181 aaPredicted RBP11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 ESPNLQ6ZVH7 1005 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 TAF8Q7Z7C8 310 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 SFTPA2Q8IWL1 248 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 NR4A3Q92570 626 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 CNOT9Q92600 299 aaKnown RBP11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 FGF14Q92915 247 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 RBM18Q96H35 190 aaKnown RBP11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 WDR92Q96MX6 357 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 TNFRSF13CQ96RJ3 184 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 COQ7Q99807 217 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 FUZQ9BT04 418 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 LRRN3Q9H3W5 708 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 UCKL1Q9NWZ5 548 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 CES1P1Q9UKY3 287 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 GTF2A1LQ9UNN4 478 aa11.71□□□□□ -0.53
RAB3IP-201ENST00000247833 GPR89AB7ZAQ6 455 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 OR2B3O76000 313 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 RPP14O95059 124 aaKnown RBP11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 DHFRP00374 187 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 FCER2P06734 321 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 DBIP07108 87 aaKnown RBP11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 GPR89BP0CG08 455 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 UGT2B7P16662 529 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 F8A1P23610 371 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 NDUFS1P28331 727 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms