RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ZXDAP98168 799 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 ULK3Q6PHR2 472 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 KBTBD8Q8NFY9 601 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 SAP25Q8TEE9 199 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 TSLPQ969D9 159 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 ZNF426Q9BUY5 554 aa21.45■■□□□ 1.02
MSX2-201ENST00000239243 FGF20Q9NP95 211 aaPredicted RBP21.45■■□□□ 1.02
MSX2-201ENST00000239243 MKKSQ9NPJ1 570 aaPredicted RBP21.45■■□□□ 1.02
MSX2-201ENST00000239243 ANKRD34CP0C6C1 535 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 ATXN8OSP0DMR3 200 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 MAKP20794 623 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 C19orf48Q6RUI8 117 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 RNFT2Q96EX2 444 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 DCSTAMPQ9H295 470 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 UBQLN3Q9H347 655 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 C20orf141Q9NUB4 165 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 CSO75390 466 aaKnown RBP21.44■■□□□ 1.02
MSX2-201ENST00000239243 GRK5P34947 590 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 DCAF7P61962 342 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 ACY1Q03154 408 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 TSTQ16762 297 aaKnown RBP21.44■■□□□ 1.02
MSX2-201ENST00000239243 PRAMEF17Q5VTA0 474 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 SLC43A2Q8N370 569 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 OR14A16Q8NHC5 309 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 MAFAQ8NHW3 353 aaPredicted RBP21.44■■□□□ 1.02
MSX2-201ENST00000239243 EDAQ92838 391 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 DAZLQ92904 295 aaKnown RBP21.44■■□□□ 1.02
MSX2-201ENST00000239243 OR8D2Q9GZM6 311 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 OSGIN1Q9UJX0 560 aa21.44■■□□□ 1.02
MSX2-201ENST00000239243 UNC13CQ8NB66 2214 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 FRG2CA6NGY1 282 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 KPNA4O00629 521 aaPredicted RBP21.43■■□□□ 1.02
MSX2-201ENST00000239243 CH25HO95992 272 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 IGKV3-11P04433 115 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 SAGP10523 405 aaPredicted RBP21.43■■□□□ 1.02
MSX2-201ENST00000239243 BMXP51813 675 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 CDH11P55287 796 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 PLK5Q496M5 336 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 NXNL2Q5VZ03 156 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 HSDL2Q6YN16 418 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 OR4C3Q8NH37 302 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 SLC2A12Q8TD20 617 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 TAPBPLQ9BX59 468 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 ATP13A2Q9NQ11 1180 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 UBQLN4Q9NRR5 601 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 CLEC2DQ9UHP7 191 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 PCDHGA3Q9Y5H0 932 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 ADAMTS20P59510 1910 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 CPED1A4D0V7 1026 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 HCN1O60741 890 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 IL33O95760 270 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 PTNP21246 168 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 ADH7P40394 386 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 GPR143P51810 404 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 COPZ1P61923 177 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 HLA-BQ31612 363 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 KLHL26Q53HC5 615 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 AADACL4Q5VUY2 407 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 ARHGAP22Q7Z5H3 698 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 FAM181AQ8N9Y4 354 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 CLIP3Q96DZ5 547 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 LCORQ96JN0 433 aaPredicted RBP21.43■■□□□ 1.02
MSX2-201ENST00000239243 OPALINQ96PE5 141 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 SLC7A5P2Q9GIP4 190 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 FN3KQ9H479 309 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 PALMDQ9NP74 551 aa21.43■■□□□ 1.02
MSX2-201ENST00000239243 MEPEQ9NQ76 525 aaPredicted RBP21.43■■□□□ 1.02
MSX2-201ENST00000239243 H2AFY2Q9P0M6 372 aaPredicted RBP21.43■■□□□ 1.02
MSX2-201ENST00000239243 EXOSC1Q9Y3B2 195 aaKnown RBP21.43■■□□□ 1.02
MSX2-201ENST00000239243 ARID1BQ8NFD5 2236 aaPredicted RBP21.42■■□□□ 1.02
MSX2-201ENST00000239243 A8MUA0 341 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 CKMT1AP12532 417 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 HPGDP15428 266 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 MLLT10P55197 1068 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 MLLT11Q13015 90 aaPredicted RBP21.42■■□□□ 1.02
MSX2-201ENST00000239243 NSDHLQ15738 373 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 GUSBP11Q6P575 273 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 ZSCAN1Q8NBB4 408 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 OR9Q1Q8NGQ5 310 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 DNAJA4Q8WW22 397 aaPredicted RBP21.42■■□□□ 1.02
MSX2-201ENST00000239243 PIGKQ92643 395 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 ZBTB20Q9HC78 741 aaPredicted RBP21.42■■□□□ 1.02
MSX2-201ENST00000239243 CABIN1Q9Y6J0 2220 aa21.42■■□□□ 1.02
MSX2-201ENST00000239243 ARHGAP33O14559 1287 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 DDAH2O95865 285 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 PDGFBP01127 241 aaPredicted RBP21.41■■□□□ 1.02
MSX2-201ENST00000239243 ZGLP1P0C6A0 271 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 LCN1P31025 176 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 VWA2Q5GFL6 755 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 RHBDD2Q6NTF9 364 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 SMARCD3Q6STE5 483 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 CADM2Q8N3J6 435 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 LNX2Q8N448 690 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 ZNF721Q8TF20 911 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 S100ZQ8WXG8 99 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 EFHD2Q96C19 240 aaPredicted RBP21.41■■□□□ 1.02
MSX2-201ENST00000239243 OR51E2Q9H255 320 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 HMG20AQ9NP66 347 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 SIGLEC7Q9Y286 467 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 SDK1Q7Z5N4 2213 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms