RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 TCTN3Q6NUS6 607 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 C22orf39Q6P5X5 142 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ZNF655Q8N720 491 aaPredicted RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SLC24A4Q8NFF2 622 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SCARB1Q8WTV0 552 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 OTULINQ96BN8 352 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 R3HDM4Q96D70 268 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 DIRAS2Q96HU8 199 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 MAP3K3Q99759 626 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ATF6BQ99941 703 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ZNF559Q9BR84 538 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 YIPF4Q9BSR8 244 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 NLNQ9BYT8 704 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 NUDT15Q9NV35 164 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 HCN3Q9P1Z3 774 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 NDRG2Q9UN36 371 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 MUC3AQ02505 3323 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TRBV23OR9-2A0A075B6M9 112 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ZNF197O14709 1029 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 LYRM1O43325 122 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 CHST10O43529 356 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TSPAN3O60637 253 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 RAB3DO95716 219 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SOD1P00441 154 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SBK2P0C263 348 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 C1GALT1C1LP0DN25 315 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 AQP1P29972 269 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 CD81P60033 236 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 RPS13P62277 151 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TRA2BP62995 288 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 GAGE1Q13065 139 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SLC35D3Q5M8T2 416 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 C10orf91Q5T1B1 145 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 HENMT1Q5T8I9 393 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TRIQKQ629K1 86 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 GPR65Q8IYL9 337 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 OR1S1Q8NH92 325 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 WFDC5Q8TCV5 224 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TMEM169Q96HH4 297 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ERMAPQ96PL5 475 aaPredicted RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 CCNL2Q96S94 520 aaPredicted RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 RBCK1Q9BYM8 510 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SPACA1Q9HBV2 294 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 GALNT9Q9HCQ5 603 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 EXOSC4Q9NPD3 245 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 PISDQ9UG56 409 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 FBXL2Q9UKC9 423 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ADAM29Q9UKF5 820 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 MEIKINA0A087WXM9 373 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 POM121BA6NF01 834 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ATG12O94817 140 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 NSA2O95478 260 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 APOC3P02656 99 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 GALTP07902 379 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 LINC00614P0C842 121 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SLC2A2P11168 524 aaPredicted RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TNFRSF1BP20333 461 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 CHI3L1P36222 383 aaPredicted RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 PMELP40967 661 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 OR1E2P47887 323 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 GNG10P50151 68 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 SMSP52788 366 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 POLR2LP62875 67 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ZXDBP98169 803 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 GLO1Q04760 184 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 LMAN2Q12907 356 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 HABP2Q14520 560 aaPredicted RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 C9orf152Q5JTZ5 239 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 LIPNQ5VXI9 398 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 C3P1Q6ZMU1 363 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ABI3BPQ7Z7G0 1075 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TMEM150AQ86TG1 271 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 NPAS4Q8IUM7 802 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 NRSN1Q8IZ57 195 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ADGRF3Q8IZF5 1079 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 APCDD1Q8J025 514 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 C19orf18Q8NEA5 215 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 OR11H7Q8NGC8 314 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 OR52J3Q8NH60 311 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 BBS10Q8TAM1 723 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 LRFN5Q96NI6 719 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ZNF607Q96SK3 696 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 MTERF1Q99551 399 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 C7orf50Q9BRJ6 194 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 POLR2J3Q9H1A7 115 aaKnown RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 TMPRSS5Q9H3S3 457 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 ACSS1Q9NUB1 689 aaPredicted RBP5.88□□□□□ -1.47
SGIP1-201ENST00000237247 WBP1LQ9NX94 342 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 GPR160Q9UJ42 338 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 A4GNTQ9UNA3 340 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 YIPF1Q9Y548 306 aa5.88□□□□□ -1.47
SGIP1-201ENST00000237247 MEX3AA1L020 520 aaKnown RBP5.87□□□□□ -1.47
SGIP1-201ENST00000237247 G3V3Q6 166 aa5.87□□□□□ -1.47
SGIP1-201ENST00000237247 K7ERQ8 282 aa5.87□□□□□ -1.47
SGIP1-201ENST00000237247 LGALS8O00214 317 aa5.87□□□□□ -1.47
SGIP1-201ENST00000237247 SYT5O00445 386 aa5.87□□□□□ -1.47
SGIP1-201ENST00000237247 HCRTR2O43614 444 aa5.87□□□□□ -1.47
SGIP1-201ENST00000237247 TMEM127O75204 238 aa5.87□□□□□ -1.47
SGIP1-201ENST00000237247 IGHV2-5P01817 119 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms