RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GATSQ8NAP1 163 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 BBS10Q8TAM1 723 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 PHF10Q8WUB8 498 aaKnown RBP10.23□□□□□ -0.77
SF3B6-201ENST00000233468 AURKBQ96GD4 344 aaPredicted RBP10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SH3YL1Q96HL8 342 aaPredicted RBP10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ANKRD27Q96NW4 1050 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 TIMP4Q99727 224 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SPATA5L1Q9BVQ7 753 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 LAT2Q9GZY6 243 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 A4GALTQ9NPC4 353 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ALKBH4Q9NXW9 302 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SLC25A37Q9NYZ2 338 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 VAPAQ9P0L0 249 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SH3BGRL2Q9UJC5 107 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 TINAGQ9UJW2 476 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ARL2BPQ9Y2Y0 163 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 MEMO1Q9Y316 297 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SLC6A5Q9Y345 797 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 IFT52Q9Y366 437 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 LIPGQ9Y5X9 500 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 TRBV5-3A0A0A0MS03 114 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 NPIPA5A0A0B4J1W7 369 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 LOC100653049A0A140TA62 436 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 AGAP5A6NIR3 686 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 NPIPA7E9PJI5 369 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 MRASO14807 208 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 ZIC3O60481 467 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 DCTN3O75935 186 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 KRT34O76011 436 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 WISP2O76076 250 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 BCHEP06276 602 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 NPIPA8P0DM63 369 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 CPN1P15169 458 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 HOXB9P17482 250 aaPredicted RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 BMP7P18075 431 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 GPX2P18283 190 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 PGCP20142 388 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 ME2P23368 584 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SLC6A2P23975 617 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 ADH6P28332 368 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 GRNP28799 593 aaKnown RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SLC6A8P48029 635 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 KCNJ10P78508 379 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 CRYZQ08257 329 aaKnown RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 RBBP4Q09028 425 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 FGFBP1Q14512 234 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 LIN52Q52LA3 116 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 GKAP1Q5VSY0 366 aaPredicted RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 B3GNT6Q6ZMB0 384 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 FGD2Q7Z6J4 655 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SNX32Q86XE0 403 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 CHERPQ8IWX8 916 aaKnown RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF440Q8IYI8 595 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 MEIOBQ8N635 442 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 OR8J3Q8NGG0 315 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 OR5M9Q8NGP3 310 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 OR5W2Q8NH69 310 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SLC38A5Q8WUX1 472 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 WDR60Q8WVS4 1066 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 TMEM234Q8WY98 164 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF607Q96SK3 696 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 TREX2Q9BQ50 279 aaPredicted RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SPATA9Q9BWV2 254 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 UGT2B28Q9BY64 529 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 PRDM14Q9GZV8 571 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SLC38A1Q9H2H9 487 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 TMEM38AQ9H6F2 299 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 EFCAB1Q9HAE3 211 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 BCL2L10Q9HD36 194 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 EXOSC3Q9NQT5 275 aaKnown RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 MED17Q9NVC6 651 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 COQ3Q9NZJ6 369 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SLAMF8Q9P0V8 285 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 SPRR3Q9UBC9 169 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 CAMK2AQ9UQM7 478 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 CARD8Q9Y2G2 431 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 RPH3AQ9Y2J0 694 aaPredicted RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 GPC6Q9Y625 555 aaPredicted RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 AP4B1Q9Y6B7 739 aa10.22□□□□□ -0.77
SF3B6-201ENST00000233468 ANKRD17O75179 2603 aaKnown RBP10.22□□□□□ -0.77
SF3B6-201ENST00000233468 C7orf72A4D263 438 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 GJE1A6NN92 205 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 H0Y3Z8 333 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 NDUFAB1O14561 156 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 GMFGO60234 142 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 TNFRSF21O75509 655 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 SERPINB7O75635 380 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 CYP7B1O75881 506 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 THBS1P07996 1170 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 CHRM4P08173 479 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 UBTFL6P0CB48 400 aaPredicted RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ETS2P15036 469 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 AGAP20933 346 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 CCR4P51679 360 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 GFRA1P56159 465 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 RPS3AP61247 264 aaKnown RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 CDK6Q00534 326 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF117Q03924 483 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 FUT5Q11128 374 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ART3Q13508 389 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms