RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 TRIM8Q9BZR9 551 aa12.38□□□□□ -0.43
VEGFA-201ENST00000230480 SAR1AQ9NR31 198 aa12.38□□□□□ -0.43
VEGFA-201ENST00000230480 ALKBH4Q9NXW9 302 aa12.38□□□□□ -0.43
VEGFA-201ENST00000230480 SPG11Q96JI7 2443 aa12.38□□□□□ -0.43
VEGFA-201ENST00000230480 ANKHD1Q8IWZ3 2542 aaKnown RBP12.38□□□□□ -0.43
VEGFA-201ENST00000230480 TEX15Q9BXT5 2789 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 AGAP5A6NIR3 686 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 CD8B2A6NJW9 211 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 NR5A2O00482 541 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 CLDN14O95500 239 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 AK1P00568 194 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 IGFBP2P18065 325 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 MSX1P28360 303 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 CHI3L1P36222 383 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 KHKP50053 298 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 DLX5P56178 289 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 LRRC74AQ0VAA2 488 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 BCL2A1Q16548 175 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 SLC25A53Q5H9E4 307 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 RIPPLY2Q5TAB7 128 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 METTL21CQ5VZV1 264 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 MTFR2Q6P444 385 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 LRRC74BQ6ZQY2 392 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 DPP10Q8N608 796 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 B4GALNT2Q8NHY0 566 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 PHOSPHO1Q8TCT1 267 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 ZNF845Q96IR2 970 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 SFXN2Q96NB2 322 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 TRNT1Q96Q11 434 aaKnown RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 HOXD1Q9GZZ0 328 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 POLE3Q9NRF9 147 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 SUCOQ9UBS9 1254 aaKnown RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 DKKL1Q9UK85 242 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 CAMK2AQ9UQM7 478 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 VDAC3Q9Y277 283 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-201ENST00000230480 PDZD2O15018 2839 aa12.37□□□□□ -0.43
VEGFA-201ENST00000230480 NKX2-6A6NCS4 301 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 FIGNL2A6NMB9 653 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 CLCA1A8K7I4 914 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 FXYD1O00168 92 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 CLIC1O00299 241 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 SCDO00767 359 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 GCM2O75603 506 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-201ENST00000230480 DNAJC8O75937 253 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-201ENST00000230480 OPN1LWP04000 364 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 HOXD4P09016 255 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-201ENST00000230480 PRF1P14222 555 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 GABRA1P14867 456 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 PRKCAP17252 672 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 GPX2P18283 190 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 NCF2P19878 526 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-201ENST00000230480 HTR1EP28566 365 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 TIMP3P35625 211 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 GZMMP51124 257 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 SEC24CP53992 1094 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 SRYQ05066 204 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 GANABQ14697 944 aaKnown RBP12.36□□□□□ -0.43
VEGFA-201ENST00000230480 RUNDC3AQ59EK9 446 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 RPS26P11Q5JNZ5 115 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-201ENST00000230480 TMEM211Q6ICI0 200 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 FIG4Q92562 907 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 RND1Q92730 232 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 MAL2Q969L2 176 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 CPPED1Q9BRF8 314 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-201ENST00000230480 SIKE1Q9BRV8 207 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 LAT2Q9GZY6 243 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 CALHM2Q9HA72 323 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 EXD2Q9NVH0 621 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 WDR45Q9Y484 360 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 LRBAP50851 2863 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 AKAP6Q13023 2319 aa12.36□□□□□ -0.43
VEGFA-201ENST00000230480 A0A0J9YW62 118 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 ZNF264O43296 627 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 EIF4E2O60573 245 aaKnown RBP12.35□□□□□ -0.43
VEGFA-201ENST00000230480 KRT75O95678 551 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 ATP6V1C1P21283 382 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 PTGER4P35408 488 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 SLC6A8P48029 635 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 CLK3P49761 638 aaKnown RBP12.35□□□□□ -0.43
VEGFA-201ENST00000230480 P2RX1P51575 399 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 ARFIP2P53365 341 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 FOXF1Q12946 379 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 KLF10Q13118 480 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 GUSBP1Q15486 140 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 C6orf10Q5SRN2 563 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 C16orf62Q7Z3J2 963 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 MISPQ8IVT2 679 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 ZNF295-AS1Q8N0V1 137 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 OR5W2Q8NH69 310 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 FBXO27Q8NI29 283 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 RNF145Q96MT1 663 aa12.35□□□□□ -0.43
VEGFA-201ENST00000230480 WFDC6Q9BQY6 131 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms