RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TMEM91Q6ZNR0 172 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 PRSS41Q7RTY9 318 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 IFT27Q9BW83 186 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 TRIM2Q9C040 744 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 C20orf141Q9NUB4 165 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 CHD7Q9P2D1 2997 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 A0A0B4J2E0 115 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 A0A1B0GX12 115 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 MT-ND5P03915 603 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 PVRP15151 417 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 DAB2P98082 770 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 EXOSC7Q15024 291 aaKnown RBP20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 FIGNL1Q6PIW4 674 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 ABI3BPQ7Z7G0 1075 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 TMEFF1Q8IYR6 380 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 C19orf18Q8NEA5 215 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 KISS1RQ969F8 398 aaPredicted RBP20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 KCTD12Q96CX2 325 aaKnown RBP20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 AHCYL2Q96HN2 611 aaKnown RBP20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 LRFN5Q96NI6 719 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 CCDC3Q9BQI4 270 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 RNF32Q9H0A6 362 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 ATP13A2Q9NQ11 1180 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 HAO2Q9NYQ3 351 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 GXYLT2A0PJZ3 443 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 PRAMEF26H0Y7S4 382 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 RGS13O14921 159 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 PLA2G10O15496 165 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 HPGDSO60760 199 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 CT62P0C5K7 136 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC2A2P11168 524 aaPredicted RBP20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 CAV3P56539 151 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 GAS6Q14393 721 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 RAB30Q15771 203 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 OOSP2Q86WS3 158 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC37A3Q8NCC5 494 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 OR5T3Q8NGG3 340 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 TP53INP1Q96A56 240 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 DCLRE1CQ96SD1 692 aaKnown RBP20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 CD93Q9NPY3 652 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 NDRG2Q9UN36 371 aaKnown RBP20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 PIAS3Q9Y6X2 628 aa20.34■□□□□ 0.85
SMARCD2-201ENST00000225742 NPIPA5A0A0B4J1W7 369 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 BLACEA4D250 179 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 CD8B2A6NJW9 211 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 B4DXG7 233 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 NPIPA7E9PJI5 369 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 CBX7O95931 251 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 NPIPA8P0DM63 369 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 CD8BP10966 210 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 HK1P19367 917 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 ACTC1P68032 377 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 ACTA1P68133 377 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 POU4F2Q12837 409 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 COL9A2Q14055 689 aaPredicted RBP20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 QPRTQ15274 297 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 ZNHIT3Q15649 155 aaPredicted RBP20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 TMEM53Q6P2H8 277 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 TMEM99Q8N816 258 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 OR13C2Q8NGS9 318 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 OR4C6Q8NH72 309 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 ENKURQ8TC29 256 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 NACC2Q96BF6 587 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 ST6GAL2Q96JF0 529 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 FRMD6Q96NE9 622 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 TEAD3Q99594 435 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 TIMP4Q99727 224 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 NDC1Q9BTX1 674 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 RNF121Q9H920 327 aa20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 ISG20L2Q9H9L3 353 aaKnown RBP20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.33■□□□□ 0.85
SMARCD2-201ENST00000225742 SMIM30A4D0T7 59 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 RFXAPO00287 272 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SEMA4FO95754 770 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 IFNGP01579 166 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SAGP10523 405 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 PRKAR1AP10644 381 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF3P17036 446 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SLC6A6P31641 620 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 NR4A2P43354 598 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 MAP2K3P46734 347 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 CCR5P51681 352 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 VSX2P58304 361 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 TMEM92Q6UXU6 159 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 RTL4Q6ZR62 310 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 Q8N402 240 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 OR52R1Q8NGF1 315 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 PTP4A1Q93096 173 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 UBL7Q96S82 380 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF426Q9BUY5 554 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 ENKD1Q9H0I2 346 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SEMA6CQ9H3T2 930 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 N6AMT1Q9Y5N5 214 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 CHD9Q3L8U1 2897 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 LINC00854A0A1B0GVQ3 168 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SHISA3A0PJX4 238 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 OR5K3A6NET4 321 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 IDH3BO43837 385 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 OR10H2O60403 315 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SLC2A5P22732 501 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms