RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 LIX1LQ8IVB5 337 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ACBD7Q8N6N7 88 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SYT14Q8NB59 555 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SPRYD4Q8WW59 207 aaPredicted RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 CDS1Q92903 461 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 OTULINQ96BN8 352 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SECISBP2Q96T21 854 aaKnown RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF350Q9GZX5 532 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 LYRM4Q9HD34 91 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 A0A1W2PS29 197 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 A8MU76 341 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 B3GALT2O43825 422 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 RGS9O75916 674 aaPredicted RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 RCBTB2O95199 551 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 APOL3O95236 402 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 CELA2BP08218 269 aaPredicted RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 CELP19835 753 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 GPR4P46093 362 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF136P52737 540 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 DAB2P98082 770 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SRSF5Q13243 272 aaKnown RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 CDK10Q15131 360 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 LTB4RQ15722 352 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 PLET1Q6UQ28 207 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF619Q8N2I2 560 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ATP6V1C2Q8NEY4 427 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 STACQ99469 402 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SDF2Q99470 211 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 LRRC61Q9BV99 259 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 POLE3Q9NRF9 147 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 COMMD3Q9UBI1 195 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 KLHL21Q9UJP4 597 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF223Q9UK11 482 aaPredicted RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SLC7A7Q9UM01 511 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 BCAT2O15382 392 aaPredicted RBP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 LALBAP00709 142 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 YES1P07947 543 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 NME1P15531 152 aaKnown RBP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 PAICSP22234 425 aaKnown RBP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 GCGRP47871 477 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 MRPS15P82914 257 aaKnown RBP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 PMS2CLQ68D20 193 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 FAM111BQ6SJ93 734 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 MEPCEQ7L2J0 689 aaKnown RBP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 TAF8Q7Z7C8 310 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 Q8N402 240 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 TMEM255BQ8WV15 326 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 SAMD8Q96LT4 415 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 CD180Q99467 661 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 HINT3Q9NQE9 182 aaKnown RBP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 DUSP22Q9NRW4 184 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 C14orf105Q9NVL8 296 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 BABAM2Q9NXR7 383 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF624Q9P2J8 865 aaPredicted RBP23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 BDP1A6H8Y1 2624 aa23.09■■□□□ 1.29
RUNDC3A-201ENST00000225441 F8A1P23610 371 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 KIR2DL3P43628 341 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 CSNK1EP49674 416 aaKnown RBP23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 AFF3P51826 1226 aaKnown RBP23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 C1orf61Q13536 156 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 SF3A2Q15428 464 aaKnown RBP23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 PRRT3Q5FWE3 981 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 LYSMD4Q5XG99 296 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 MEX3DQ86XN8 651 aaKnown RBP23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 CPOQ8IVL8 374 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 TCTE3Q8IZS6 198 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 LNX2Q8N448 690 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 KCT2Q8NC54 265 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 HS6ST2Q96MM7 605 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 TMEM43Q9BTV4 400 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 MMP28Q9H239 520 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 FBXO4Q9UKT5 387 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 BAIAP2Q9UQB8 552 aa23.08■■□□□ 1.29
RUNDC3A-201ENST00000225441 STX11O75558 287 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 CPMP14384 443 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 DHPSP49366 369 aaPredicted RBP23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 SHC2P98077 582 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 ZNF362Q5T0B9 420 aaPredicted RBP23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 NIPAL3Q6P499 406 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 SHFQ7M4L6 423 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 CDK20Q8IZL9 346 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 ASCC1Q8N9N2 400 aaKnown RBP23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 CAMKVQ8NCB2 501 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 OR4E2Q8NGC2 313 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 RSC1A1Q92681 617 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 PRSS27Q9BQR3 290 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 SRMSQ9H3Y6 488 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 RERGLQ9H628 205 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 SLA2Q9H6Q3 261 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 SYNPO2LQ9H987 977 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 DAPP1Q9UN19 280 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 SLC22A7Q9Y694 548 aa23.08■■□□□ 1.28
RUNDC3A-201ENST00000225441 FAM86C2PA6NEL3 165 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 CH25HO95992 272 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 GUSBP08236 651 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 BMP7P18075 431 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 SOX18P35713 384 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 CD79BP40259 229 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 TAS2R43P59537 309 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms