RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Rsbn1Q80T69 795 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Cst13Q80ZN5 141 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 AmnQ99JB7 458 aaKnown RBP21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Vmp1Q99KU0 406 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Rsl24d1Q99L28 163 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Sucnr1Q99MT6 317 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Rbm18Q9CR83 190 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Snx20Q9D2Y5 313 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Vmn1r29Q9EQ41 303 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Pmm2Q9Z2M7 242 aa21.01■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Sult2a6B2RVI8 285 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Fbxw24E9PXM9 466 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Olfr209L7N1X3 305 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Sftpa1P35242 248 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Cdc42P60766 191 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 VwceQ3U515 929 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Gm10696Q3UTC4 357 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 RalyQ64012 312 aaKnown RBP21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Dlgap3Q6PFD5 977 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Slitrk5Q810B7 957 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Ces2eQ8BK48 559 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Ubald2Q8BQH4 164 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Thap1Q8CHW1 210 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 St8sia6Q8K4T1 398 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Vmn1r30Q8R2D2 302 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 TapbplQ8VD31 451 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Hrasls5Q9CPX5 270 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Tnfrsf12aQ9CR75 129 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Mospd2Q9CWP6 518 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 D10Jhu81eQ9D172 266 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Exosc1Q9DAA6 195 aaKnown RBP21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 PaicsQ9DCL9 425 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Cyp2d22Q9JKY7 500 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Prss16Q9QXE5 509 aa21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Tnrc6aQ3UHK8 1896 aaKnown RBP21■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Tcrg-V7A0A0A6YYE8 116 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 AmbnO55189 407 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Mtnd4P03911 459 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Pmp22P16646 161 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Pcsk2P21661 637 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 ArntP53762 791 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Polr2iP60898 125 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Dtx4Q6PDK8 616 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Carns1Q6ZPS2 827 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Myl12aQ6ZWQ9 172 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Olfr1252Q7TQZ2 314 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Olfr1167Q7TR26 316 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Smndc1Q8BGT7 238 aaKnown RBP20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Dcaf12Q8BGZ3 453 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 NagpaQ8BJ48 517 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 ChdhQ8BJ64 596 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 StgQ8BM15 349 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Nuak2Q8BZN4 639 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Pqlc3Q8C6U2 202 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Tmem203Q8R235 136 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Vmn1r201Q8R262 300 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Olfr643Q8VGY1 314 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Dhrs7Q9CXR1 338 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Cthrc1Q9D1D6 245 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Izumo2Q9DA16 220 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Pou5f2Q9DAC9 329 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 B4galt2Q9Z2Y2 369 aa20.99■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Ighv1-42A0A0A6YY38 117 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Olfr1555-ps1A0A140LHT7 321 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Zfp873A0A1B0GT64 667 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Slc25a43A2A3V2 341 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Gm6880A3KG45 208 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Serpine1P22777 402 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 BgnP28653 369 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Adam12Q61824 903 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Zic2Q62520 530 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Apex2Q68G58 516 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Ckap4Q8BMK4 575 aaKnown RBP20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 OacylQ8BML2 685 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Clic5Q8BXK9 251 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 P2ry10bQ8BY68 352 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Colec10Q8CF98 277 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Fbxw17Q8CFE8 466 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Gpr1Q8K087 353 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Rdh16f2Q8K3M1 318 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Cables2Q8K3M5 476 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Slc25a37Q920G8 338 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 BollQ924M5 281 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Rcbtb2Q99LJ7 551 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Uck2Q99PM9 261 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Bex4Q9CWT2 118 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Timm50Q9D880 353 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Pdcd1lg2Q9WUL5 247 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 SvilQ8K4L3 2170 aa20.98■□□□□ 0.95
Scn1b-201ENSMUST00000098548 2010106E10RikA2ANY3 279 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Slfn9B1ARD6 910 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Gm19345G3UYD9 124 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 FxnO35943 207 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Rhox6O70238 227 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Dync1i2O88487 612 aaKnown RBP20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Tgfb1P04202 390 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Taf1aP97357 453 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Kcnk2P97438 426 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 CybaQ61462 192 aa20.97■□□□□ 0.95
Scn1b-201ENSMUST00000098548 Otub1Q7TQI3 271 aa20.97■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms