RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Sgsm3Q8VCZ6 750 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Mrgpra8Q91ZC4 305 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Reg4Q9D8G5 157 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Il23aQ9EQ14 196 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Zfp292Q9Z2U2 2698 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Pmm1O35621 262 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Asna1O54984 348 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 FapP97321 761 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Kcnk9Q3LS21 402 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm10750Q3V0I0 133 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Slc16a11Q5NC32 447 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Exosc3Q7TQK4 274 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr1045Q7TR80 315 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Znf385bQ8BXJ8 482 aaKnown RBP9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Rfwd3Q8CIK8 774 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Lyzl6Q9DA11 148 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Ift22Q9DAI2 185 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 NplQ9DCJ9 320 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cd209fD3Z1H5 274 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Vmn2r50E9PW61 861 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Fbxw24E9PXM9 466 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 A430033K04RikE9Q8G5 680 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm20509G3UZF1 325 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Nfkbil1O88995 381 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Pcbp3P57722 371 aaKnown RBP9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Phf12Q5SPL2 1003 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Efcab3Q80X60 432 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Clba1Q8BHN9 321 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gucy1b2Q8BXH3 824 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Lactb2Q99KR3 288 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Nudt17Q9CWD3 296 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm10762Q9CZN6 115 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Elovl4Q9EQC4 312 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cnot9Q9JKY0 299 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Trbc2A0A075B5J4 173 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Ighv15-2A0A0A6YX72 118 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr1375A0A0N4SUP0 313 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Tmem233D3Z1U7 110 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 F830016B08RikG3UWE2 416 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm20696H3BJN7 74 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 ClppO88696 272 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 P01851 173 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Htr1bP28334 386 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Thbs1P35441 1170 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Hcrtr2P58308 460 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Il18r1Q61098 537 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Shc4Q6S5L9 626 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Acsm4Q80W40 580 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cnot3Q8K0V4 751 aaKnown RBP9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Thoc3Q8VE80 351 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Slc2a10Q8VHD6 536 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cep97Q9CZ62 856 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cers4Q9D6J1 393 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Psma4Q9R1P0 261 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Eci2Q9WUR2 391 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm28363A0A087WQW2 129 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr653E9PVA0 317 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm17175E9Q528 179 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm21820J3KMU2 361 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Abcb1aP21447 1276 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Dppa5bP85965 119 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Fam117bQ3U3E2 584 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Adamts16Q69Z28 1222 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Fbxo34Q80XI1 695 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Q8C0X8 640 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Mchr1Q8JZL2 353 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 FRRS1Q8K385 592 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 GsdmcQ99NB5 468 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 OgfrQ99PG2 633 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 PglsQ9CQ60 257 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Chek2Q9Z265 546 aa9.15□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm8251F6VUT6 1994 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 4930595D18RikD3Z642 64 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gm5407E9Q7Q1 248 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Fbxw15L7N1X6 466 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Papss2O88428 621 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Hcn1O88704 910 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ugt2b17P17717 530 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 CebpbP28033 296 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ucp3P56501 308 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Zfp41Q02526 198 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 B4galnt1Q09200 533 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Mex3dQ3UE17 643 aaKnown RBP9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ccdc160Q3UYG1 323 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ei24Q61070 340 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Zar1Q80SU3 361 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Rdh12Q8BYK4 316 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Atxn7l2Q8C8K6 696 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 RfesdQ8K2P6 157 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Il17rcQ8K4C2 698 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ugt2b38Q91WH2 530 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Dus3lQ91XI1 637 aaKnown RBP9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Pex13Q9D0K1 405 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Idh3aQ9D6R2 366 aaKnown RBP9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Stk19Q9JHN8 254 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Lgi1Q9JIA1 557 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 March7Q9WV66 693 aa9.15□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Pdzd8B9EJ80 1147 aa9.14□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Fam71dD3YV92 440 aa9.14□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Tulp3O88413 460 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 92.5 ms