RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tas2r119Q9JKT2 335 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rad9aQ9Z0F6 389 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dock11A2AF47 2073 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tcte1A6H639 498 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr652B9EHE6 318 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Il13ra1O09030 424 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gp1baO35930 734 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prkar1bP12849 381 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 CryzP47199 331 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cnksr3Q8BMA3 555 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Synpo2lQ8BWB1 975 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc22a22Q8R0S9 554 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr352Q8VGJ9 315 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prl8a9Q9CQ58 241 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tomm40lQ9CZR3 308 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Il36bQ9D6Z6 183 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mbtps1Q9WTZ2 1052 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Syngr4Q9Z1L2 233 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1493-ps1A0A140LHU2 316 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmem185aA2AF53 350 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Trgv2A2J008 116 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmem44E9Q4M0 433 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nr1h5E9Q5A6 505 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rab6aP35279 208 aaKnown RBP11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Apoc2Q05020 97 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nt5c3bQ3UFY7 300 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ssr4Q62186 172 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 WdcpQ6NV72 663 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hif1anQ8BLR9 349 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ncr1Q8C567 325 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Arhgap8Q9CXP4 425 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tex19.2Q9D5S1 317 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Plin3Q9DBG5 437 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r172Q9EPS4 313 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Skint8A7XV07 398 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Xpnpep2B1AVD1 674 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 2310061I04RikB8JJ69 315 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm5458L7N219 204 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Yod1Q8CB27 343 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1008Q8VGC7 313 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr167Q8VGJ5 312 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr339Q8VGK8 309 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Usp18Q9WTV6 368 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr396-ps1A0A0U1RNF5 211 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cd300ld2A2A7W0 305 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 G6pdxQ00612 515 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr174Q3U507 335 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Elf3Q3UPW2 391 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prtn3Q61096 254 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Creg2Q8BGC9 288 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr769Q8K501 312 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Igsf8Q8R366 611 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pdzd3Q99MJ6 498 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Lpar3Q9EQ31 354 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 ClnkQ9QZE2 435 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cdh20Q9Z0M3 801 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Adamts3E9Q287 1204 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 MlipQ5FW52 269 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 SprQ64105 261 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Arrdc3Q7TPQ9 414 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr594Q7TRR4 311 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 DglucyQ8BH86 617 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Unc5dQ8K1S2 956 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr811Q8VFI1 319 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1033Q8VFK5 310 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cyp4v2Q9DBW0 525 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr957Q9EQB7 311 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tor3aQ9ER38 385 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prmt1Q9JIF0 371 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Spag4Q9JJF2 443 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Il20Q9JKV9 176 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 TfecQ9WTW4 317 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm45716A0A1B0GRQ0 93 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cped1B2RX70 1026 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc6a13P31649 602 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cbr1P48758 277 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc16a14Q8K1C7 512 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fbxo45Q8K3B1 286 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 SharpinQ91WA6 380 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rbm7Q9CQT2 265 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r68E9Q0V3 319 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hsd17b12O70503 312 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Anxa7Q07076 463 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr331Q5NC44 324 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mapk15Q80Y86 549 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 H1fntQ8CJI4 398 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr18Q8K1Z6 331 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 NepnQ9CQ76 512 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Kdelr2Q9CQM2 212 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cyb5bQ9CQX2 146 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pin1Q9QUR7 165 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm8797A0A0A6YW67 77 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm5678A0A1B0GRG8 277 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r204I7HIK1 302 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 UbbP0CG49 305 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 UbcP0CG50 734 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rps27aP62983 156 aaKnown RBP11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Uba52P62984 128 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Kcnab3P97382 249 aa11.31□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tigd3Q7TM95 470 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms