RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Mtnd4P03911 459 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zfp26P10076 861 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cxcl10P17515 98 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pax4P32115 349 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Thbs1P35441 1170 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ucp3P56501 308 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Col10a1Q05306 680 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Apex2Q68G58 516 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Otud6aQ6IE21 290 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Znf503Q7TMA2 652 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Trim69Q80X56 500 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fbxw13Q8BI57 466 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Spata33Q8C624 132 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc49a3Q8CE47 516 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mchr1Q8JZL2 353 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mtg1Q8R2R6 326 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr854Q8VFF1 315 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Acot7Q91V12 381 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pcdhga6Q91XY2 932 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc22a30Q96LX3 552 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 BlvraQ9CY64 295 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Snx20Q9D2Y5 313 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fam45aQ9D8N2 357 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fezf2Q9ESP5 455 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tcf7l1Q9Z1J1 584 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr1555-ps1A0A140LHT7 321 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr74A2BHP6 318 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 HpnO35453 436 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 B3galt1O54904 326 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc2a2P14246 523 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 JupQ02257 745 aaKnown RBP8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm10750Q3V0I0 133 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mtmr11Q3V1L6 700 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc17a4Q5NCM1 492 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dsg4Q7TMD7 1041 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr684Q7TRN8 312 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Kiaa0895lQ810A5 467 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Wdr92Q8BGF3 357 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rae1Q8C570 368 aaKnown RBP8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc35b4Q8CIA5 331 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Znf768Q8R0T2 568 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 CthQ8VCN5 398 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dhrs4Q99LB2 279 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 P2ry12Q9CPV9 347 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc13a2Q9ES88 586 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slco1a1Q9QXZ6 670 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Sema6cQ9WTM3 931 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr1123A2AT85 323 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 SmoktcrA2KF29 484 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tmem200cJ3QK46 637 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zfp28P10078 825 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Hoxc11P31313 304 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 ArntP53762 791 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Psme2P97372 239 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tfap2cQ61312 449 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rpa2Q62193 270 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Il17aQ62386 158 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ugt8Q64676 541 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tas2r104Q7M723 302 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 2610318N02RikQ80VT5 305 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tmem251Q8BH26 163 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cadm2Q8BLQ9 435 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lhfpl6Q8BM86 200 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Arhgap28Q8BN58 729 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gfm1Q8K0D5 751 aaKnown RBP8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Galnt18Q8K1B9 622 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 LzicQ8K3C3 190 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cables2Q8K3M5 476 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vmn1r217Q8R270 298 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pex19Q8VCI5 299 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rmnd5bQ91YQ7 393 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm10762Q9CZN6 115 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lrrc51Q9DAK8 192 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 NfkbiaQ9Z1E3 314 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pmm2Q9Z2M7 242 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 BptfA2A654 3036 aaKnown RBP8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr1432A0A140LHS7 346 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lrr1D3YY91 422 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fbxw24E9PXM9 466 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Kbtbd6E9PYD7 486 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm20696H3BJN7 74 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Papss2O88428 621 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fabp1P12710 127 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nkx2-2P42586 273 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 RoraP51448 523 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Elavl1P70372 326 aaKnown RBP8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 CiartQ3TQ03 375 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Sez6l2Q4V9Z5 910 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pik3c3Q6PF93 887 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cnih3Q6ZWS4 160 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tas2r140Q7TQA4 312 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Spag1Q80ZX8 901 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rhbdd3Q8BP97 385 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 P2ry10bQ8BY68 352 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc25a21Q8BZ09 298 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Hcar1Q8C131 343 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dleu7Q8CHZ8 209 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gin1Q8K259 518 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Acy3Q91XE4 318 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ogfod3Q9D136 315 aa8.05□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms