RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lgi4Q8K1S1 537 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mcoln1Q99J21 580 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ppa1Q9D819 289 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cyhr1Q9QXA1 311 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sult6b2B7ZWN4 290 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm21897J3KMP5 500 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm8229K7N749 213 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fgf3P05524 245 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cep76Q0VEJ0 659 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Alkbh2Q6P6J4 239 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tas2r120Q7M721 295 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pex12Q8VC48 359 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hyal3Q8VEI3 412 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Lrrc69Q9D9Q0 347 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Isoc2bQ9DCC7 210 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Arfgap1Q9EPJ9 414 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1193A2AV13 318 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm21904A8HG57 180 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm10608E9PZ13 166 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm21866J3QMH4 180 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Klrb1cP27814 223 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Polr1cP52432 346 aaKnown RBP11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Art1Q60935 325 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pon3Q62087 354 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Lair1Q8BG84 263 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc7a6Q8BGK6 515 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc26a9Q8BU91 790 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pla2g15Q8VEB4 412 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mia3Q8BI84 1930 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Smok4aA0JLX3 433 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm6710A2ART0 554 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pcsk4P29121 655 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hephl1Q3V1H3 1159 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 BC061237Q6P8I2 184 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Lin28aQ8K3Y3 209 aaKnown RBP11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Angptl7Q8R1Q3 337 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Kiaa2013Q91X21 634 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Metap1dQ9CPW9 335 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ier3ip1Q9CR20 82 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tnfsf13Q9D777 241 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Asic5Q9R0Y1 495 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc37a4A0A1L1SUI3 450 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Etv2P41163 335 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gpx3P46412 226 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tspan5P62080 268 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc22a18Q78KK3 406 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fam181bQ80VF6 417 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Atg4bQ8BGE6 393 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Arel1Q8CHG5 823 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Iglon5Q8HW98 336 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gpat4Q8K2C8 456 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn1r198Q8R263 300 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sfxn2Q925N2 322 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tmem9Q9CR23 183 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Usp18Q9WTV6 368 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mfsd13bA0A1L1SUA2 455 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr59B1ARL3 323 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mterf1bB9EJ57 379 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Prdx4O08807 274 aaKnown RBP11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc6a11P31650 627 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Casp3P70677 277 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Acvr1bQ61271 505 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hamp2Q80T19 83 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ctdsp2Q8BX07 270 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 FRRS1Q8K385 592 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 VitQ8VHI5 650 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mrgprb5Q91ZB9 322 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mettl18Q9CZ09 362 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tm9sf3Q9ET30 587 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Upk3aQ9JKX8 287 aa11.13□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Bcorl1A2AQH4 1781 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Foxa1P35582 468 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cdh10P70408 788 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tbccd1Q640P7 552 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pced1aQ6P1Z5 449 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zbtb42Q811H0 420 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fbxo46Q8BG80 603 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Akr7a2Q8CG76 367 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr854Q8VFF1 315 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pskh1Q91YA2 424 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mrm1Q99J25 320 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Otub2Q9CQX0 234 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tmem225Q9D9S2 230 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ajm1A2AJA9 974 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Csf1P07141 552 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tmem69Q3KQJ0 245 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Taar2Q5QD17 339 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Znf592Q8BHZ4 1262 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc25a21Q8BZ09 298 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 FlcnQ8QZS3 579 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mrpl19Q9D338 292 aaKnown RBP11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Xylt2Q9EPL0 865 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 MNCb-2990Q9JJ93 142 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Scn10aQ6QIY3 1958 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Igkv10-94A0A075B5L1 115 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zfp534A2A7A1 661 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1338A2ACY7 313 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Aadacl2B2RWD2 401 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Prps1l3G3UXL2 318 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm8888J3QPX5 126 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms