RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ankrd7Q9D504 279 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 St6galnac4Q9R2B6 360 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 FapP97321 761 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1134Q7TR43 312 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp65Q91W94 390 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Phf3B2RQG2 2025 aaKnown RBP15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr839-ps1A0A1D5RMH6 312 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pm20d2A3KG59 431 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp989H3BLB0 661 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Atf6bO35451 699 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 FxnO35943 207 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Kcne1P23299 129 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Stt3aP46978 705 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp82Q6P9Y7 530 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pck2Q8BH04 640 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Znf689Q8BKK5 500 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ssuh2Q8C3L1 340 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn1r200Q8R281 312 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Oosp1Q925U0 202 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Hint3Q9CPS6 165 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Katnbl1Q9CWJ3 299 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Plek2Q9WV52 353 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm12248A0A1W2P8B8 313 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 BidP70444 195 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Csnk2a1Q60737 391 aaKnown RBP15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ppp1r3bQ8C767 284 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr957Q9EQB7 311 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gabrr3B2RXA8 464 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pcbp2Q61990 362 aaKnown RBP15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Slc6a5Q761V0 799 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Mppe1Q80XL7 396 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 AardQ811W1 167 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1254Q8VFB1 314 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zdhhc7Q91WU6 308 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 AspnQ99MQ4 373 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Aaed1Q9D1A0 226 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Sohlh2Q9D489 467 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gde1Q9JL56 331 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn1r12G5E8G1 307 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm5458L7N219 204 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gp6P0C191 313 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ubfd1Q78JW9 368 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr676Q8VGZ9 317 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Slc35b2Q91ZN5 431 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ctu1Q99J10 420 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tbc1d20Q9D9I4 402 aa15.73■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Adh6bA0A1D5RMB0 384 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1032A2ATE5 310 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Man2b1O09159 1013 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 VegfaQ00731 214 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Wnk3Q80XP9 1757 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pip5k1cO70161 661 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nudt19P11930 357 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tstd2Q3U269 495 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Hapln3Q80WM5 359 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Sytl3Q99N48 607 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zswim1Q9CWV7 455 aaKnown RBP15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Naalad2Q9CZR2 740 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 B3galt1O54904 326 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rcor3Q6PGA0 451 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Chst9Q76EC5 413 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pcyt2Q922E4 404 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Phf19Q9CXG9 578 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 C1qtnf2Q9D8U4 294 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Muc13P19467 573 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 TshrP47750 764 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Apcdd1Q3U128 514 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Prss43Q76HL1 382 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Clrn3Q8BHH8 226 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn1r231Q8R2A3 311 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1257Q8VGP0 309 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nectin1Q9JKF6 515 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 C1galt1c1Q9JMG2 316 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Lgr5Q9Z1P4 907 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn2r84D3YWE3 849 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Fam84bD3YXJ5 310 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm8225D3Z536 292 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 TCAIMQ66JZ4 499 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Eri1Q7TMF2 345 aaKnown RBP15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Got1l1Q7TSV6 404 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vrk1Q80X41 440 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Lamb2Q61292 1799 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cd209fD3Z1H5 274 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr620E9PZ66 313 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nptx1Q62443 432 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Arhgef4Q7TNR9 484 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Mblac2Q8BL86 279 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 FuomQ8R2K1 153 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Fbxo6Q9QZN4 295 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 MpoP11247 718 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Stfa2P35174 103 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Anxa7Q07076 463 aaKnown RBP15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ccdc86Q9JJ89 426 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Akap6E9Q9K8 2307 aa15.72■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm10720D3Z1I5 223 aa15.71■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp599E9PWP1 548 aa15.71■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Igfbp2P47877 305 aa15.71■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cd38P56528 304 aa15.71■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nrsn1P97799 196 aa15.71■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Mc2rQ64326 296 aa15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms