RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Cnr2P47936 347 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ephb3P54754 993 aaKnown RBP12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 MazP56671 477 aaKnown RBP12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 TsxP70675 144 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Dlk1Q09163 385 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Bcl2a1cQ0P538 128 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Q3KQP7 184 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Sema3gQ4LFA9 780 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr684Q7TRN8 312 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 1700001K19RikQ80ZT1 219 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rcc2Q8BK67 520 aaKnown RBP12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc25a32Q8BMG8 316 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tmem17Q8K0U3 198 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr353Q8VGK0 311 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fmo4Q8VHG0 560 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr103Q920Y8 313 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rp1l1Q8CGM2 1859 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm8251F6VUT6 1994 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ssc4dA1L0T3 586 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Mpeg1A1L314 713 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 1700023F06RikA2AB62 382 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc25a34A2ADF7 318 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm14399A2ARW8 610 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Zfp97E9PZP6 546 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Vmn2r105E9Q3A5 860 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Dbx2F8VQH7 377 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 S100a2J3QMC7 104 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Zfp960L7N267 546 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Vmn2r102L7N279 857 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cacng2O88602 323 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cdc6O89033 562 aaKnown RBP12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 H2-T3P14432 384 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ccr3P51678 359 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Yes1Q04736 541 aaKnown RBP12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Defb43Q30KM9 69 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Thoc6Q5U4D9 341 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 IppkQ6P1C1 489 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ffar4Q7TMA4 361 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pramef8Q8CE24 480 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc1a7Q8JZR4 559 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 LctlQ8K1F9 566 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Irf2bp1Q8R3Y8 584 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr272Q8VGA0 319 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Eral1Q9CZU4 437 aaKnown RBP12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Hoga1Q9DCU9 321 aa12.56□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gpr137cE9Q343 423 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Nthl1O35980 300 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cyp2j5O54749 501 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 RngttO55236 597 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Srp54P14576 504 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gabra3P26049 492 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Dbx1P52950 335 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cd38P56528 304 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Kcnn3P58391 732 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ap2s1P62743 142 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pak6Q3ULB5 682 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cnrip1Q5M8N0 164 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Bdkrb1Q61125 334 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Nr0b2Q62227 260 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Taf6Q62311 678 aaKnown RBP12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Zic2Q62520 530 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 CipcQ8R0W1 432 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tmem45bQ8VCZ2 278 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gatad2bQ8VHR5 594 aaKnown RBP12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ces2cQ91WG0 561 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 WacQ924H7 646 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Krt88Q9CPR6 171 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ssr2Q9CPW5 183 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 EcdQ9CS74 641 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Spns3Q9D232 514 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 DlstQ9D2G2 454 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Elovl4Q9EQC4 312 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Adamdec1Q9R0X2 467 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Asb3Q9WV72 525 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cdh23Q99PF4 3354 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Mcm3apQ9WUU9 1971 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Nup214Q80U93 2085 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr1164A2AVT5 326 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ces2gE9PV38 560 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tmem44E9Q4M0 433 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fcn2O70497 314 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fpr1P33766 364 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Sult2a2P50236 285 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cdh11P55288 796 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Htr1fQ02284 366 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Bcap29Q61334 240 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tvp23aQ6NVH0 222 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 PdgfrlQ6PE55 375 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Kiss1Q6Y4S4 130 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr298Q7TS06 332 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fmr1nbQ80ZA7 238 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rspo2Q8BFU0 243 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Atg4bQ8BGE6 393 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Dcaf12l2Q8BGW4 469 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 SrrdQ8K2M3 249 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc25a42Q8R0Y8 318 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Zdhhc5Q8VDZ4 715 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Sfxn2Q925N2 322 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Chmp1b1Q99LU0 199 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pnp2Q9D8C9 305 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms