RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Pskh1Q91YA2 424 aa17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Hint3Q9CPS6 165 aa17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Med18Q9CZ82 208 aa17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Prkar1aQ9DBC7 381 aa17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Dgat2Q9DCV3 388 aa17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 GhrlQ9EQX0 117 aa17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Habp4Q9JKS5 411 aaKnown RBP17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Lmx1aQ9JKU8 382 aa17.16■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Olfr1366A0A1W2P740 328 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Slc9a6A1L3P4 702 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Zfp442A2AQA0 667 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Btbd16E9Q173 522 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Gpr137cE9Q343 423 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Gm8229K7N749 213 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Scarb2O35114 478 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Gosr2O35166 212 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 H2-K1P01901 369 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Tra2bP62996 288 aaKnown RBP17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Fgf13P70377 245 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Cd53Q61451 219 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 E2f1Q61501 430 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Olfr1161Q7TR29 321 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Sgpp2Q810K3 354 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Kctd7Q8BJK1 289 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Gpr152Q8BXS7 511 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Cox10Q8CFY5 443 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Mchr1Q8JZL2 353 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Tlr1Q9EPQ1 795 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Plscr3Q9JIZ9 296 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Cyp2d22Q9JKY7 500 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Olfr601A2RS33 314 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Csnk2a2O54833 350 aaKnown RBP17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Fgf9P54130 208 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Alox12eP55249 662 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Cd38P56528 304 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Cd80Q00609 306 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Fxyd2Q04646 70 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Gm732Q3V0P9 516 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Nox3Q672J9 568 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Smarcd3Q6P9Z1 483 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Chst9Q76EC5 413 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Agbl3Q8CDP0 1006 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Ssr3Q9DCF9 185 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Dennd4cA6H8H2 1906 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Dock8Q8C147 2100 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Unc13cQ8K0T7 2210 aa17.15■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Nup214Q80U93 2085 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Olfr1315-ps1A0A140LI66 314 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 A0A1Y7VIU7 259 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 CtcflA2APF3 636 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Gm14085A2AWR5 660 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Coq10aE9Q3H6 259 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 TpoP35419 914 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Adam26bQ6IMH6 699 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Methig1Q76I26 264 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Znf770Q8BIQ8 705 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Faim2Q8K097 317 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Cables2Q8K3M5 476 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Clrn1Q8K445 232 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Ccdc58Q8R3Q6 144 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Nxnl1Q8VC33 217 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Olfr1316Q8VG12 314 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Hdac8Q8VH37 377 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Cd209dQ91ZW8 237 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Upf1Q9EPU0 1124 aaKnown RBP17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 Rnf32Q9JIT1 368 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 NsdhlQ9R1J0 362 aa17.14■□□□□ 0.34
Ccdc3-201ENSMUST00000027988 TprnA2AI08 749 aaKnown RBP17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Tmem235B1AQL3 211 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr723E9PZU2 309 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr724K7N5X7 309 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 EmdO08579 259 aaKnown RBP17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Rgs5O08850 181 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Sp3O70494 783 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Nfatc1O88942 717 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Smad5P97454 465 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Wdr75Q3U821 830 aaKnown RBP17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Sema3gQ4LFA9 780 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Serinc4Q5XK03 492 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr474Q8VFC9 310 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Oas3Q8VI93 1138 aaKnown RBP17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Eef1e1Q9D1M4 174 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Isg20Q9JL16 300 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Xpnpep2B1AVD1 674 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 SrsxB2RZI1 361 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 9330182O14RikJ3QNB2 140 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 DhfrP00375 187 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Il2raP01590 268 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Acp2P24638 423 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Mtf1Q07243 675 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr12Q60894 333 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Nceh1Q8BLF1 408 aaKnown RBP17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Slc22a29Q8BWG6 551 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 NdnfQ8C119 568 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ssuh2Q8C3L1 340 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Cyp2u1Q9CX98 530 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Serinc3Q9QZI9 472 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 CorinQ9Z319 1113 aa17.14■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Cacna1eQ61290 2272 aa17.13■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Igkv15-103A0A140T8P3 115 aa17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms