RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RCBTB2O95199 551 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 UTS2O95399 124 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 HMGN1P05114 100 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 RAB40ALP0C0E4 278 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 UBL4AP11441 157 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 CD59P13987 128 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 MMP11P24347 488 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ELK4P28324 431 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 POLR2IP36954 125 aaKnown RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 PLA2G5P39877 138 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 OMPP47874 163 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 RFX3P48380 749 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 IDH2P48735 452 aaKnown RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 CTBP2P56545 445 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 SLC26A5P58743 744 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 CSRP2Q16527 193 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 MEP1AQ16819 746 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ANKDD1AQ495B1 522 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 TMEM201Q5SNT2 666 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 C12orf73Q69YU5 71 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 WBP2NLQ6ICG8 309 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 SLC27A4Q6P1M0 643 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 PAPD4Q6PIY7 484 aaKnown RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF517Q6ZMY9 492 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 PRR23CQ6ZRP0 262 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 OLIG3Q7RTU3 272 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 PRSS48Q7RTY5 328 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ZER1Q7Z7L7 766 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 COMTD1Q86VU5 262 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ENTHD1Q8IYW4 607 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 CACTIN-AS1Q8N1I8 211 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 OR52L1Q8NGH7 329 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF420Q8TAQ5 688 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 SLC22A8Q8TCC7 542 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 TMEM239Q8WW34 195 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 TTC9Q92623 222 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 GAL3ST4Q96RP7 486 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 NODALQ96S42 347 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 SPSB2Q99619 263 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 BCL7BQ9BQE9 202 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 POLDIP3Q9BY77 421 aaKnown RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ULBP3Q9BZM4 244 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 LAT2Q9GZY6 243 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 RACGAP1Q9H0H5 632 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 NXF5Q9H1B4 397 aaKnown RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 DUSP21Q9H596 190 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 KCNE5Q9UJ90 142 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 SLC7A7Q9UM01 511 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 DTX4Q9Y2E6 619 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 PCDHGB5Q9Y5G0 923 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 PCDHGA3Q9Y5H0 932 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 R4GN57 208 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 CCDC187A0A096LP49 1063 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 A0A1W2PQ72 361 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 GTPBP1O00178 669 aaKnown RBP8.95□□□□□ -0.98
PHGDH-215ENST00000641371 CDX4O14627 284 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-215ENST00000641371 RGS10O43665 173 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 TSPAN2O60636 221 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 TPST2O60704 377 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 HCN1O60741 890 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 FAM20BO75063 409 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 CBFA2T3O75081 653 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 REM1O75628 298 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 TIAF1O95411 115 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 IGKV1D-16P01601 117 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 LINGO3P0C6S8 592 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 PIPP12273 146 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ICAM2P13598 275 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 BMP7P18075 431 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ITIH1P19827 911 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ACAA2P42765 397 aaKnown RBP8.95□□□□□ -0.98
PHGDH-215ENST00000641371 SLC9A3P48764 834 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 NR0B1P51843 470 aaKnown RBP8.95□□□□□ -0.98
PHGDH-215ENST00000641371 SUMO3P55854 103 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-215ENST00000641371 RNF4P78317 190 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 SLC35A2P78381 396 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 CDK5Q00535 292 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 PRKCDQ05655 676 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 NCF4Q15080 339 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 OCLNQ16625 522 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 CTU2Q2VPK5 515 aaKnown RBP8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ZBED5Q49AG3 693 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 NADK2Q4G0N4 442 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ALG10BQ5I7T1 473 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 FNDC7Q5VTL7 733 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 CDCP2Q5VXM1 449 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ANKRD34AQ69YU3 496 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 TCEAL6Q6IPX3 200 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 C5orf46Q6UWT4 87 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 PTCHD4Q6ZW05 846 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 TMPRSS11FQ6ZWK6 438 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 B3GNT8Q7Z7M8 397 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 MRGPREQ86SM8 312 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 GLRX5Q86SX6 157 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 C9orf40Q8IXQ3 194 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ZSCAN1Q8NBB4 408 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 SLC38A9Q8NBW4 561 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF540Q8NDQ6 660 aa8.95□□□□□ -0.98
PHGDH-215ENST00000641371 NFAM1Q8NET5 270 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms