RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 ATP6V1B1P15313 513 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 HPGDP15428 266 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 TBXA2RP21731 343 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 IL12BP29460 328 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 KRT20P35900 424 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 GGT2P36268 569 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 CRISP1P54107 249 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 CDH15P55291 814 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 ESRRGP62508 458 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 CDK5R2Q13319 367 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 PTGES3Q15185 160 aaKnown RBP16.77■□□□□ 0.27
PHGDH-209ENST00000641074 CD226Q15762 336 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 C6orf141Q5SZD1 244 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 CD300LDQ6UXZ3 194 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 C16orf47Q6ZP98 133 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF550Q7Z398 422 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 LSRQ86X29 649 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-209ENST00000641074 MEX3DQ86XN8 651 aaKnown RBP16.77■□□□□ 0.27
PHGDH-209ENST00000641074 APLFQ8IW19 511 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-209ENST00000641074 CNIH3Q8TBE1 160 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 TP53INP1Q96A56 240 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 DEPDC7Q96QD5 511 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 MRPS26Q9BYN8 205 aaKnown RBP16.77■□□□□ 0.27
PHGDH-209ENST00000641074 TMEM27Q9HBJ8 222 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 AASSQ9UDR5 926 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 SLC35A3Q9Y2D2 325 aa16.77■□□□□ 0.27
PHGDH-209ENST00000641074 PCNX2A6NKB5 2137 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 LOC102723996A0A087X1L8 192 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 CCDC187A0A096LP49 1063 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 TRBV11-1A0A0K0K1C0 115 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 C9orf172C9J069 976 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 SCDO00767 359 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 IGFBP1P08833 259 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-209ENST00000641074 LCN1P31025 176 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 IFNGR2P38484 337 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 ADH7P40394 386 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 HES3Q5TGS1 186 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF613Q6PF04 617 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 WDR88Q6ZMY6 472 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 MBOAT2Q6ZWT7 520 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 RRM2BQ7LG56 351 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 TIPARPQ7Z3E1 657 aaKnown RBP16.76■□□□□ 0.27
PHGDH-209ENST00000641074 GLRX5Q86SX6 157 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 GATSQ8NAP1 163 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 OR2Y1Q8NGV0 311 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 NUBPLQ8TB37 319 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 THAP3Q8WTV1 239 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-209ENST00000641074 HDAC2Q92769 488 aaKnown RBP16.76■□□□□ 0.27
PHGDH-209ENST00000641074 PHOX2BQ99453 314 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 ADNPQ9H2P0 1102 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 PADI1Q9ULC6 663 aa16.76■□□□□ 0.27
PHGDH-209ENST00000641074 EP300Q09472 2414 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-209ENST00000641074 SOX14O95416 240 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 DLGAP3O95886 979 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 CLPTM1O96005 669 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 TP53P04637 393 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-209ENST00000641074 POU1F1P28069 291 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 OMPP47874 163 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 COX10Q12887 443 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 TMEM236Q5W0B7 351 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 C6orf15Q6UXA7 325 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-209ENST00000641074 NRMQ8IXM6 262 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 LSMEM1Q8N8F7 131 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 FAM71CQ8NEG0 241 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 PIGXQ8TBF5 258 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 GNPDA2Q8TDQ7 276 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 GRHL3Q8TE85 626 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 FAM46AQ96IP4 442 aaKnown RBP16.75■□□□□ 0.27
PHGDH-209ENST00000641074 SPRY4Q9C004 299 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 TRIM2Q9C040 744 aa16.75■□□□□ 0.27
PHGDH-209ENST00000641074 A0A0B4J2E0 115 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 A0A1B0GWA3 101 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 A0A1B0GX12 115 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 TMEM200CA6NKL6 621 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 ZAR1LA6NP61 321 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 PIP5K1CO60331 668 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 PTNP21246 168 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 NBL1P41271 181 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 PNLIPRP2P54317 469 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 NUP107P57740 925 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 EIF3IQ13347 325 aaKnown RBP16.74■□□□□ 0.27
PHGDH-209ENST00000641074 MAD2L1BPQ15013 274 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-209ENST00000641074 PCOLCEQ15113 449 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 RBM48Q5RL73 367 aaKnown RBP16.74■□□□□ 0.27
PHGDH-209ENST00000641074 ENTHD1Q8IYW4 607 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 DEFB124Q8NES8 71 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 OR8K3Q8NH51 312 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 FAM81AQ8TBF8 368 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 RNF217Q8TC41 542 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 PHOSPHO1Q8TCT1 267 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 RASSF1Q9NS23 344 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 CNIH4Q9P003 139 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 PCDHGA3Q9Y5H0 932 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 OIP5O43482 229 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF354AO60765 605 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-209ENST00000641074 TFAP2AP05549 437 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 UBL4AP11441 157 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 CRHBPP24387 322 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 IDH2P48735 452 aaKnown RBP16.74■□□□□ 0.27
PHGDH-209ENST00000641074 GTF2A1P52655 376 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms