RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 CROCCQ5TZA2 2017 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 HCRTR1O43613 425 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-215ENST00000639145 HNRNPA0Q13151 305 aaKnown RBP12.72□□□□□ -0.37
SCARB2-215ENST00000639145 HLA-BQ31612 363 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 HSD17B12Q53GQ0 312 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 NKAPLQ5M9Q1 402 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 PODNL1Q6PEZ8 512 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 MED25Q71SY5 747 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 TSPYL5Q86VY4 417 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-215ENST00000639145 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 ISL2Q96A47 359 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 MS4A6EQ96DS6 147 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 TMEM9BQ9NQ34 198 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 ABCG2Q9UNQ0 655 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 ZNF443Q9Y2A4 671 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-215ENST00000639145 MTCH2Q9Y6C9 303 aa12.72□□□□□ -0.37
SCARB2-215ENST00000639145 C12orf71A8MTZ7 269 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 F5H5K5 113 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 PCDH17O14917 1159 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 CD79AP11912 226 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 E2F1Q01094 437 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 OR1Q1Q15612 314 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 TMPRSS12Q86WS5 348 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 ZNF227Q86WZ6 799 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 ETFBKMTQ8IXQ9 262 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 MMP21Q8N119 569 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 ESX1Q8N693 406 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 ZFPM2Q8WW38 1151 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 CPPED1Q9BRF8 314 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-215ENST00000639145 SMOC1Q9H4F8 434 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 NXT1Q9UKK6 140 aaKnown RBP12.71□□□□□ -0.37
SCARB2-215ENST00000639145 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 SNX11Q9Y5W9 270 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 CACNA1IQ9P0X4 2223 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 SH3PXD2BA1X283 911 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 CD8B2A6NJW9 211 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 LMO7DNF2Z398 122 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 F13BP05160 661 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 SLC35E2P0CK97 266 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 CD8BP10966 210 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 COL9A1P20849 921 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 PRPS1P60891 318 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 COX20Q5RI15 118 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 CBLL1Q75N03 491 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 LIX1LQ8IVB5 337 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 FBXL6Q8N531 539 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 OR2I1PQ8NGU4 316 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 CHTF18Q8WVB6 975 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 C8orf44Q96CB5 159 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 ALG14Q96F25 216 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 ZNF419Q96HQ0 510 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-215ENST00000639145 ZNF583Q96ND8 569 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 GINS4Q9BRT9 223 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 DAPP1Q9UN19 280 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
SCARB2-215ENST00000639145 IDSB3KWA1 339 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 SLC1A7O00341 560 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 PRAMEF10O60809 474 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 ALOX12BO75342 701 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 PSKH1P11801 424 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 PSMD7P51665 324 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.38
SCARB2-215ENST00000639145 ECH1Q13011 328 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 TRMT12Q53H54 448 aaKnown RBP12.71□□□□□ -0.38
SCARB2-215ENST00000639145 C22orf42Q6IC83 251 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 FUNDC1Q8IVP5 155 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 SIRT6Q8N6T7 355 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 LCORQ96JN0 433 aaPredicted RBP12.71□□□□□ -0.38
SCARB2-215ENST00000639145 MRGPRX3Q96LB0 322 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 IRF2BPLQ9H1B7 796 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 MED28Q9H204 178 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 OR51B6Q9H340 312 aa12.71□□□□□ -0.38
SCARB2-215ENST00000639145 BOKQ9UMX3 212 aaPredicted RBP12.71□□□□□ -0.38
SCARB2-215ENST00000639145 CCNKO75909 580 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 RPS5P46782 204 aaKnown RBP12.7□□□□□ -0.38
SCARB2-215ENST00000639145 LIM2P55344 173 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 PITPNAQ00169 270 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 B4GALNT1Q00973 533 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 SRSF5Q13243 272 aaKnown RBP12.7□□□□□ -0.38
SCARB2-215ENST00000639145 LEXMQ3ZCV2 418 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-215ENST00000639145 CYHR1Q6ZMK1 362 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 GPALPP1Q8IXQ4 340 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 SAMD12Q8N8I0 201 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 HPS1Q92902 700 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 CST11Q9H112 138 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 SESN1Q9Y6P5 492 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 TRBV5-4A0A0C4DH59 114 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 TARM1B6A8C7 271 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 PRKNO60260 465 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-215ENST00000639145 LCATP04180 440 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 ABOP16442 354 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
SCARB2-215ENST00000639145 SSR4P51571 173 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 SQSTM1Q13501 440 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 MAD2L1BPQ15013 274 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-215ENST00000639145 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
SCARB2-215ENST00000639145 TMEM201Q5SNT2 666 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms