RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 OLFM2O95897 454 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 INSP01308 110 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 THRBP10828 461 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 H2AFXP16104 143 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-211ENST00000638889 AKT2P31751 481 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 LHX2P50458 406 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 SNX1Q13596 522 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 C2orf76Q3KRA6 126 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 OR8G2PQ6IF36 304 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 TMEM184AQ6ZMB5 413 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 TMEM26Q6ZUK4 368 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 TAF8Q7Z7C8 310 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 BATF2Q8N1L9 274 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 Q8N9W7 124 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 ZSCAN4Q8NAM6 433 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-211ENST00000638889 MDS2Q8NDY4 140 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 OR52E1Q8NGJ3 308 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 OR52I1Q8NGK6 324 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 URGCPQ8TCY9 931 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 NCLNQ969V3 563 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 POLR3FQ9H1D9 316 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-211ENST00000638889 SLC25A51Q9H1U9 297 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 VCXQ9H320 206 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 PPDPFQ9H3Y8 114 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 NECAP2Q9NVZ3 263 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 IL20RAQ9UHF4 553 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 PSG11Q9UQ72 335 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 FAM170AA1A519 330 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 WASHC1A8K0Z3 465 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 MMP1P03956 469 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 GCFC2P16383 781 aaKnown RBP1.83□□□□□ -2.12
CCDC7-211ENST00000638889 CCNCP24863 283 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 SUCLG1P53597 346 aaKnown RBP1.83□□□□□ -2.12
CCDC7-211ENST00000638889 UNC119Q13432 240 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 SYPL1Q16563 259 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 WDR74Q6RFH5 385 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-211ENST00000638889 UNQ9370/PRO34162Q6UXP9 181 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 WDR88Q6ZMY6 472 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 RNF165Q6ZSG1 346 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 ARMCX2Q7L311 632 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 LPCAT2Q7L5N7 544 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 LRRC70Q7Z2Q7 622 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 FAM71E2Q8N5Q1 922 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 DNAJA4Q8WW22 397 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-211ENST00000638889 CCDC43Q96MW1 224 aaKnown RBP1.83□□□□□ -2.12
CCDC7-211ENST00000638889 FEM1AQ9BSK4 669 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 RPAP3Q9H6T3 665 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-211ENST00000638889 C1orf123Q9NWV4 160 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 CRLS1Q9UJA2 301 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 ZNF225Q9UK10 706 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 PRPF19Q9UMS4 504 aaKnown RBP1.83□□□□□ -2.12
CCDC7-211ENST00000638889 RPGRIP1LQ68CZ1 1315 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 COL1A2P08123 1366 aa1.83□□□□□ -2.12
CCDC7-211ENST00000638889 IGLV4-60A0A075B6I1 120 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 RNF222A6NCQ9 220 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 SLC9B1P1A6NJY1 282 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 SERPINE3A8MV23 424 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 DLGAP1O14490 977 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 KERAO60938 352 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 PCCAP05165 728 aaPredicted RBP1.82□□□□□ -2.12
CCDC7-211ENST00000638889 CD5P06127 495 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 AHCYP23526 432 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 ATP5A1P25705 553 aaKnown RBP1.82□□□□□ -2.12
CCDC7-211ENST00000638889 PAX5Q02548 391 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 PDIA5Q14554 519 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 DNAJC21Q5F1R6 531 aaKnown RBP1.82□□□□□ -2.12
CCDC7-211ENST00000638889 PAGE3Q5JUK9 113 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 ETFRF1Q6IPR1 90 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 SCYL2Q6P3W7 929 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 ARSKQ6UWY0 536 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 ZFP2Q6ZN57 461 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 ZNF429Q86V71 674 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 ZNF740Q8NDX6 193 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 STKLD1Q8NE28 680 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 ANKRD20A12PQ8NF67 263 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 UPRTQ96BW1 309 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 MCHR1Q99705 422 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 CITED1Q99966 193 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 SLC17A9Q9BYT1 436 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 NMNAT2Q9BZQ4 307 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 MAGT1Q9H0U3 335 aa1.82□□□□□ -2.12
CCDC7-211ENST00000638889 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-211ENST00000638889 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-211ENST00000638889 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-211ENST00000638889 NKX2-6A6NCS4 301 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 TMX2-CTNND1H3BSU7 103 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 HCN1O60741 890 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 STX11O75558 287 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 SNAPINO95295 136 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 SLC4A1P02730 911 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 CSF2P04141 144 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 HBQ1P09105 142 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 ANXA4P09525 319 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-211ENST00000638889 RALAP11233 206 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 ZNF823P16415 610 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 SERPINA2P20848 420 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 ADSSP30520 456 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 EPHX2P34913 555 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 HSPA1LP34931 641 aa1.81□□□□□ -2.12
CCDC7-211ENST00000638889 CSNK1DP48730 415 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms