RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SLC22A31A6NKX4 558 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 PLPP2O43688 288 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 AHCYP23526 432 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 TAS2R43P59537 309 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 CCNJQ5T5M9 372 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 RPL13AP3Q6NVV1 102 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 GAL3ST3Q96A11 431 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 MARVELD3Q96A59 401 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 TBX5Q99593 518 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.7■□□□□ 0.582e-6■■■□□ 17.6
SYNGAP1-227ENST00000638142 PPIL3Q9H2H8 161 aaKnown RBP18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 MED20Q9H944 212 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC23A1Q9UHI7 598 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 CACNG2Q9Y698 323 aa18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 LAMA2P24043 3122 aaKnown RBP18.7■□□□□ 0.58
SYNGAP1-227ENST00000638142 PRR19A6NJB7 356 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZSCAN5BA6NJL1 495 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 SHOXO15266 292 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 MID1O15344 667 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 KCNJ13O60928 360 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 DHFRP00374 187 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 AP2S1P53680 142 aaPredicted RBP18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 TJAP1Q5JTD0 557 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 PYHIN1Q6K0P9 492 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 ARL9Q6T311 187 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 IL20RBQ6UXL0 311 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR2L13Q8N349 312 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR10H4Q8NGA5 316 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 SATB2Q9UPW6 733 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 MDC1Q14676 2089 aaKnown RBP18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 A0A0A6YYJ9 748 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZC3H12DA2A288 527 aaKnown RBP18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 FAM86C2PA6NEL3 165 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 LEUTXA8MZ59 168 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 CHP2O43745 196 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 TFPIP10646 304 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 PTNP21246 168 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 CACUL1Q86Y37 369 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 HDDC3Q8N4P3 179 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 DNAJC5GQ8N7S2 189 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZFPM2Q8WW38 1151 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 MED28Q9H204 178 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 CMC2Q9NRP2 79 aa18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 GOLGA4Q13439 2230 aaKnown RBP18.69■□□□□ 0.58
SYNGAP1-227ENST00000638142 C7orf66A4D0T2 115 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 RCBTB2O95199 551 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 POU2F2P09086 479 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 TBXA2RP21731 343 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 RPE65Q16518 533 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 WDR45BQ5MNZ6 344 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 AMIGO1Q86WK6 493 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 TMEM239Q8WW34 195 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 COL26A1Q96A83 441 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 HCAR1Q9BXC0 346 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 PLEKHM1Q9Y4G2 1056 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 SNRNP200O75643 2136 aaKnown RBP18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 LOC105371267A0A1B0GV96 52 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 RFPL3O75679 317 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 PAK4O96013 591 aaPredicted RBP18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 MAKP20794 623 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 BTCP35070 178 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 CLDN2P57739 230 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 TNFRSF17Q02223 184 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 DUSP5Q16690 384 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 KLHL12Q53G59 568 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 FAM78AQ5JUQ0 283 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZBTB37Q5TC79 503 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 GPR135Q8IZ08 494 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 LRRC17Q8N6Y2 441 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 SCMH1Q96GD3 660 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 SDF2Q99470 211 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 KLF15Q9UIH9 416 aa18.68■□□□□ 0.58
SYNGAP1-227ENST00000638142 MYO7AQ13402 2215 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 A0A0G2JK05 382 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 PRR23D1E9PI22 279 aaPredicted RBP18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 EEF1E1O43324 174 aaKnown RBP18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 CEACAM5P06731 702 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 PRR23D2P0DMB1 279 aaPredicted RBP18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 IFI30P13284 250 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 UQCRC1P31930 480 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 CAPZA2P47755 286 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 COL9A2Q14055 689 aaPredicted RBP18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 PDGFRLQ15198 375 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 CST6Q15828 149 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 NTRK2Q16620 822 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 BCL2L15Q5TBC7 163 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 FAM205BPQ63HN1 556 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 SDE2Q6IQ49 451 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 WDR88Q6ZMY6 472 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 CEACAM19Q7Z692 300 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 PXKQ7Z7A4 578 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 ASPGQ86U10 573 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 KCT2Q8NC54 265 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 ABHD4Q8TB40 342 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 GPR137Q96N19 417 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZNF350Q9GZX5 532 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 CRISPLD2Q9H0B8 497 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 ING4Q9UNL4 249 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC17A4Q9Y2C5 497 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms