RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ZXDBP98169 803 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF345Q14585 488 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 PON3Q15166 354 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ACER2Q5QJU3 275 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 TAPT1Q6NXT6 567 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 NLRC5Q86WI3 1866 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 IQCF1Q8N6M8 205 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 HORMAD2Q8N7B1 307 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 RELL2Q8NC24 303 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 SCAMP5Q8TAC9 235 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 IGSF8Q969P0 613 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 EXOSC8Q96B26 276 aaKnown RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 EBPLQ9BY08 206 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 PBX4Q9BYU1 374 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 MFFQ9GZY8 342 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 OR10A4Q9H209 315 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 NOX3Q9HBY0 568 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 STOX2Q9P2F5 926 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 RHCGQ9UBD6 479 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 CPA4Q9UI42 421 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ST3GAL5Q9UNP4 418 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 SCML2Q9UQR0 700 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 BRCA2P51587 3418 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 FXYD6-FXYD2A0A087WZ82 144 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 COLCA2A8K830 154 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 RHPN2P1A8MT19 583 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 PGRMC2O15173 223 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 PPM1DO15297 605 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 SLC16A5O15375 505 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 CXCL14O95715 111 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 ASGR2P07307 311 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 AGTR1P30556 359 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 OR1E1P30953 314 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 ACVRL1P37023 503 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 HCCSP53701 268 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 PPIAP62937 165 aaKnown RBP11.22□□□□□ -0.61
CAPN3-221ENST00000638141 UBE2IP63279 158 aaKnown RBP11.22□□□□□ -0.61
CAPN3-221ENST00000638141 INSL4Q14641 139 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 ANKRD39Q53RE8 183 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 FAM111BQ6SJ93 734 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF322Q6U7Q0 402 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF783Q6ZMS7 281 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 C15orf54Q8N8G6 183 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 FXYD6Q9H0Q3 95 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 CHRDQ9H2X0 955 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 TXNRD2Q9NNW7 524 aa11.22□□□□□ -0.61
CAPN3-221ENST00000638141 AFF4Q9UHB7 1163 aaKnown RBP11.22□□□□□ -0.61
CAPN3-221ENST00000638141 TRBV5-4A0A0C4DH59 114 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 A0A1W2PQH9 124 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 UBE2QL1A1L167 161 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 RFPL4AA6NLU0 287 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 RFPL4AL1F8VTS6 287 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 RFXAPO00287 272 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 GPR37O15354 613 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 VEGFDO43915 354 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 ADAMTS4O75173 837 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 KHDRBS3O75525 346 aaKnown RBP11.21□□□□□ -0.61
CAPN3-221ENST00000638141 GATBO75879 557 aaKnown RBP11.21□□□□□ -0.61
CAPN3-221ENST00000638141 AKR7A3O95154 331 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 SLC25A14O95258 325 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-221ENST00000638141 POP4O95707 220 aaKnown RBP11.21□□□□□ -0.61
CAPN3-221ENST00000638141 IGHV2-5P01817 119 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 HOXD9P28356 352 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-221ENST00000638141 TAS2R60P59551 318 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 FZD5Q13467 585 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 KCNAB1Q14722 419 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 PEA15Q15121 130 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 MAPK14Q16539 360 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 KLHL26Q53HC5 615 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 TCTN3Q6NUS6 607 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 LHFPL3Q86UP9 236 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 ZFP82Q8N141 532 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 CELF5Q8N6W0 485 aaKnown RBP11.21□□□□□ -0.61
CAPN3-221ENST00000638141 CD99L2Q8TCZ2 262 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 SPRYD4Q8WW59 207 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-221ENST00000638141 PEX11GQ96HA9 241 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 PFDN5Q99471 154 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 PKP4Q99569 1192 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 SLC35A5Q9BS91 424 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 STARD7Q9NQZ5 370 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 WBP1LQ9NX94 342 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 RBPJLQ9UBG7 517 aa11.21□□□□□ -0.61
CAPN3-221ENST00000638141 SLC31A2O15432 143 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 NDUFB6O95139 128 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF286BP0CG31 522 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 RNF224P0DH78 156 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 AGAP20933 346 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 KCNA10Q16322 511 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.62
CAPN3-221ENST00000638141 H3F3CQ6NXT2 135 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 CDC73Q6P1J9 531 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 NHLRC1Q6VVB1 395 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 PXKQ7Z7A4 578 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 NAA40Q86UY6 237 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 SERPINA9Q86WD7 417 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 CIR1Q86X95 450 aaPredicted RBP11.21□□□□□ -0.62
CAPN3-221ENST00000638141 KLBQ86Z14 1044 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms