RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 NPAS1Q99742 590 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 PAIP2Q9BPZ3 127 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 DPY30Q9C005 99 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 C20orf27Q9GZN8 174 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 PCDHGB4Q9UN71 923 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 EMC9Q9Y3B6 208 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 TESMINQ9Y4I5 508 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 ACTL7BQ9Y614 415 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 KCNE3Q9Y6H6 103 aa13.48□□□□□ -0.25
CACNA1A-230ENST00000636768 RNF103-CHMP3A0A140T963 221 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 GTPBP1O00178 669 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 TNFSF11O14788 317 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 CXCL13O43927 109 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 RAF1P04049 648 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 HRGP04196 525 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 TUBBP07437 444 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 CD8BP10966 210 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 EIF1P41567 113 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 SLC6A8P48029 635 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 ATP12AP54707 1039 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 CTBP2P56545 445 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 RPS26P62854 115 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 FOXF1Q12946 379 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 STX3Q13277 289 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 KEAP1Q14145 624 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 KLHL26Q53HC5 615 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 HBMQ6B0K9 141 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 ZNF474Q6S9Z5 364 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 ESPNLQ6ZVH7 1005 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 FAM214BQ7L5A3 538 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 ANKRD42Q8N9B4 389 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 OR4A15Q8NGL6 344 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 SLC35G5Q96KT7 338 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 SORT1Q99523 831 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 KLHDC3Q9BQ90 382 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 MED18Q9BUE0 208 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 NUF2Q9BZD4 464 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 KLHL28Q9NXS3 571 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 ELOVL5Q9NYP7 299 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 CARD8Q9Y2G2 431 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 HIVEP1P15822 2718 aa13.47□□□□□ -0.25
CACNA1A-230ENST00000636768 DUXAA6NLW8 204 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 RNASET2O00584 256 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 ADAMDEC1O15204 470 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 CGAP01215 116 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 LINGO3P0C6S8 592 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 MATN1P21941 496 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 PSMA4P25789 261 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 ELK4P28324 431 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 SFTPDP35247 375 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 UGT2B10P36537 528 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 PCYT1AP49585 367 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 P2RX1P51575 399 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 CCR4P51679 360 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 SUMO3P55854 103 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 MPP2Q14168 576 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 GUSBP1Q15486 140 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 EXOC3L2Q2M3D2 409 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 CTU2Q2VPK5 515 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 TNFAIP8L3Q5GJ75 292 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 HHATQ5VTY9 493 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 C6orf120Q7Z4R8 191 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 LILRA2Q8N149 483 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 CLEC4FQ8N1N0 589 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 ZNF610Q8N9Z0 462 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 VPS37AQ8NEZ2 397 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 RFWD2Q8NHY2 731 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 POC1BQ8TC44 478 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 GMPPAQ96IJ6 420 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 ADGRG7Q96K78 797 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 KLHL15Q96M94 604 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 ALPK1Q96QP1 1244 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 CXXC4Q9H2H0 198 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 ZNF226Q9NYT6 803 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 CLEC4AQ9UMR7 237 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 DTNAQ9Y4J8 743 aa13.46□□□□□ -0.25
CACNA1A-230ENST00000636768 A0A0J9YW62 118 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 ESPNB1AK53 854 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 C16orf97H3BN30 126 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 OIP5O43482 229 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 SS18L1O75177 396 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 CPSF4O95639 269 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 AK1P00568 194 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 UBL4AP11441 157 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 LBPP18428 481 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 CCKARP32238 428 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 PPP2R2AP63151 447 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 NDUFAF6Q330K2 333 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 ANXA8L1Q5VT79 327 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 CBLN3Q6UW01 205 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 C16orf62Q7Z3J2 963 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 ANKRD46Q86W74 232 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 OR8J2Q8NGG1 315 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 OR6K3Q8NGY3 331 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 FBXO27Q8NI29 283 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 REXO5Q96IC2 774 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 WFIKKN1Q96NZ8 548 aa13.45□□□□□ -0.26
CACNA1A-230ENST00000636768 SDF2Q99470 211 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms