RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 A0A0G2JPF8 293 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 CCDC160A6NGH7 325 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 OR6C70A6NIJ9 312 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 HNRNPCL2B2RXH8 293 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 HNRNPCL3B7ZW38 293 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 CXCR6O00574 342 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 CLOCKO15516 846 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 ABCB7O75027 752 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 ICOSLGO75144 302 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 UTS2O95399 124 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 WDPCPO95876 746 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 HNRNPCL4P0DMR1 293 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 GGT1P19440 569 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 PCSK6P29122 969 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 CYB561P49447 251 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 ALDH3A2P51648 485 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 MFAP5Q13361 173 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 VEZF1Q14119 521 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF791Q3KP31 576 aaPredicted RBP13.26□□□□□ -0.29
LINC00339-208ENST00000634934 PRAMEF8Q5VWM4 474 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 PRAMEF7Q5VXH5 474 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 NUP54Q7Z3B4 507 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 CYP4Z2PQ8N1L4 340 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF619Q8N2I2 560 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 SVOPLQ8N434 492 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 OR10G3Q8NGC4 313 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 NSMCE2Q96MF7 247 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 QRSL1Q9H0R6 528 aaKnown RBP13.26□□□□□ -0.29
LINC00339-208ENST00000634934 MAGIXQ9H6Y5 334 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 MTHFD2LQ9H903 347 aaPredicted RBP13.26□□□□□ -0.29
LINC00339-208ENST00000634934 CACYBPQ9HB71 228 aaKnown RBP13.26□□□□□ -0.29
LINC00339-208ENST00000634934 BCL2L10Q9HD36 194 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 PALMDQ9NP74 551 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 FLRT3Q9NZU0 649 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF451Q9Y4E5 1061 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 SAC3D1A6NKF1 404 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 MKRN2OSH3BPM6 223 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 TP53I11O14683 189 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 KIAA0513O60268 411 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 HPGDP15428 266 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 DCTP40126 519 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 CD96P40200 585 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 RNF144AP50876 292 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-208ENST00000634934 GABARAPL2P60520 117 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 NTRK2Q16620 822 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 RBM48Q5RL73 367 aaKnown RBP13.25□□□□□ -0.29
LINC00339-208ENST00000634934 GLYATQ6IB77 296 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 TUBA3EQ6PEY2 450 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 PCSK4Q6UW60 755 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 KRT73Q86Y46 540 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 DND1Q8IYX4 353 aaKnown RBP13.25□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF614Q8N883 585 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 OR4C3Q8NH37 302 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 ISOC1Q96CN7 298 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 ZG16BQ96DA0 208 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 TMCO6Q96DC7 493 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF607Q96SK3 696 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 UGT2B28Q9BY64 529 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 HOXD1Q9GZZ0 328 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 SAP130Q9H0E3 1048 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 PLGRKTQ9HBL7 147 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 LRFN1Q9P244 771 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 SPENQ96T58 3664 aaKnown RBP13.25□□□□□ -0.29
LINC00339-208ENST00000634934 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
LINC00339-208ENST00000634934 M0QX08 132 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 ITGB2P05107 769 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 GUSBP08236 651 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 LCN1P31025 176 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 ATP12AP54707 1039 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 TMBIM6P55061 237 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 PCBP3P57721 371 aaKnown RBP13.24□□□□□ -0.29
LINC00339-208ENST00000634934 ARG2P78540 354 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 IL18R1Q13478 541 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 DAG1Q14118 895 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 FAM98BQ52LJ0 330 aaKnown RBP13.24□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF773Q6PK81 442 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 RTL4Q6ZR62 310 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 GPALPP1Q8IXQ4 340 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 PEX5LQ8IYB4 626 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 TTC9Q92623 222 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 HGDQ93099 445 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 FAM162AQ96A26 154 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 NODALQ96S42 347 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 BCL7BQ9BQE9 202 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 CHID1Q9BWS9 393 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 UBQLN4Q9NRR5 601 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 RYDENQ9NUL5 291 aaKnown RBP13.24□□□□□ -0.29
LINC00339-208ENST00000634934 PCDHGA10Q9Y5H3 936 aa13.24□□□□□ -0.29
LINC00339-208ENST00000634934 CENPVL1A0A0U1RR11 272 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SCDO00767 359 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 EI24O14681 340 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 GCM2O75603 506 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SERPINB7O75635 380 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 UGT2B17O75795 530 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 PDE9AO76083 593 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 OXSR1O95747 527 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 OPN1SWP03999 348 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ALPLP05186 524 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms