RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SQSTM1Q13501 440 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 USF2Q15853 346 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-209ENST00000627620 CCDC28AQ8IWP9 274 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 PRR18Q8N4B5 295 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 CCDC71LQ8N9Z2 235 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 OR9K2Q8NGE7 335 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 EGLN2Q96KS0 407 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 UHRF1Q96T88 793 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-209ENST00000627620 DUSP23Q9BVJ7 150 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 AGPAT4Q9NRZ5 378 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 KLHL13Q9P2N7 655 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 CA5BQ9Y2D0 317 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 OTOL1A6NHN0 477 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-209ENST00000627620 OR8U9P0C7N5 309 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 GCH1P30793 250 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 CPOXP36551 454 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 CSNK1A1P48729 337 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 TMEM201Q5SNT2 666 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 CNIH2Q6PI25 160 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 VRK2Q86Y07 508 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 ACOT11Q8WXI4 607 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-209ENST00000627620 LMF2Q9BU23 707 aaKnown RBP12.03□□□□□ -0.48
SCN8A-209ENST00000627620 SLC25A18Q9H1K4 315 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 CHRDQ9H2X0 955 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 SACM1LQ9NTJ5 587 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 HSFX1Q9UBD0 423 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 MYH8P13535 1937 aa12.03□□□□□ -0.48
SCN8A-209ENST00000627620 TRAV27A0A087WT01 109 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 A0A1B0GV50 99 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 PTTG1O95997 202 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 OPN1LWP04000 364 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 CPMP14384 443 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 CST5P28325 142 aaPredicted RBP12.02□□□□□ -0.48
SCN8A-209ENST00000627620 GJA4P35212 333 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 NR4A2P43354 598 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 CAMLGP49069 296 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 GPR50Q13585 617 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 CDKN3Q16667 212 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 CLEC1AQ8NC01 280 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 PHB2Q99623 299 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.48
SCN8A-209ENST00000627620 TVP23AA6NH52 213 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 BCAS1O75363 584 aaPredicted RBP12.02□□□□□ -0.48
SCN8A-209ENST00000627620 HTR3AP46098 478 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 RIPPLY1Q0D2K3 151 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 RAB40BQ12829 278 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 ENTPD8Q5MY95 495 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 BTBD2Q9BX70 525 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 OR52D1Q9H346 318 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 TAAR2Q9P1P5 351 aa12.02□□□□□ -0.48
SCN8A-209ENST00000627620 A0A0G2JMP0 313 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 LOC102723532A0A0G2JNH3 316 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 TRBV11-1A0A0K0K1C0 115 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 POU3F2P20265 443 aaPredicted RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 GDF1P27539 372 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 CA5AP35218 305 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 ADRA1AP35348 466 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 EEF1A1P68104 462 aaKnown RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 FAM78AQ5JUQ0 283 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 PODNL1Q6PEZ8 512 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 SLC16A9Q7RTY1 509 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 OR4M2Q8NGB6 313 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 GCDHQ92947 438 aaPredicted RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 INSM2Q96T92 566 aaPredicted RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 APMAPQ9HDC9 416 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 PLEKHJ1Q9NW61 149 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 SF3B4Q15427 424 aaKnown RBP eCLIP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 RPE65Q16518 533 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 OR9A4Q8NGU2 314 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 PDLIM5Q96HC4 596 aaKnown RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 ST6GALNAC5Q9BVH7 336 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 ZBTB42B2RXF5 422 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 H3BMQ9 156 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 NUDT21O43809 227 aaKnown RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 DNAJB6O75190 326 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 GYPBP06028 91 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 BMP4P12644 408 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 IDUAP35475 653 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 ERV3-1Q14264 604 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 ADAMTS16Q8TE57 1224 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 CNOT9Q92600 299 aaKnown RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 COG8Q96MW5 612 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 NXF5Q9H1B4 397 aaKnown RBP12.02□□□□□ -0.49
SCN8A-209ENST00000627620 OR51E2Q9H255 320 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 POLHQ9Y253 713 aa12.02□□□□□ -0.49
SCN8A-209ENST00000627620 BOLA2-SMG1P6H3BVE0 249 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 SC5DO75845 299 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 GPR75O95800 540 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 APOC3P02656 99 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 ZNF14P17017 642 aaPredicted RBP12.01□□□□□ -0.49
SCN8A-209ENST00000627620 CXCR4P61073 352 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 PRDX1Q06830 199 aaKnown RBP12.01□□□□□ -0.49
SCN8A-209ENST00000627620 KIAA1211LQ6NV74 962 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 PAQR9Q6ZVX9 377 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 CBLL1Q75N03 491 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 LILRB2Q8N423 598 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 HYLS1Q96M11 299 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 TOX2Q96NM4 488 aa12.01□□□□□ -0.49
SCN8A-209ENST00000627620 ZNF587Q96SQ5 575 aaPredicted RBP12.01□□□□□ -0.49
SCN8A-209ENST00000627620 RHBDD3Q9Y3P4 386 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms