RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 PRIM2P49643 509 aa22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 RPL38P63173 70 aaKnown RBP22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 POU6F2P78424 691 aaPredicted RBP22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 CCNJQ5T5M9 372 aa22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 R3HCC1LQ7Z5L2 792 aaKnown RBP22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 C10orf107Q8IVU9 208 aa22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 ROBO4Q8WZ75 1007 aa22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 JADE3Q92613 823 aa22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 OTUB1Q96FW1 271 aaPredicted RBP22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 KLHL15Q96M94 604 aa22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 TRMOQ9BU70 441 aa22.53■■□□□ 1.2
R3HDM4-208ENST00000626716 LSM1O15116 133 aaKnown RBP22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 EFNA1P20827 205 aaPredicted RBP22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 PPP2R2BQ00005 443 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 MLC1Q15049 377 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 CD226Q15762 336 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 TDRPQ86YL5 185 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 STEAP2Q8NFT2 490 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 FAM120BQ96EK7 910 aaKnown RBP22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 REXO5Q96IC2 774 aaKnown RBP22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 GATA5Q9BWX5 397 aaPredicted RBP22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 HDHD5Q9BXW7 423 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 ANKZF1Q9H8Y5 726 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 TIGARQ9NQ88 270 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 DNAJC15Q9Y5T4 150 aa22.52■■□□□ 1.2
R3HDM4-208ENST00000626716 HMGN2P05204 90 aaKnown RBP22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 DDX5P17844 614 aaKnown RBP22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 KRT4P19013 534 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 SFTPDP35247 375 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 GALNTL6Q49A17 601 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 MTERF4Q7Z6M4 381 aaKnown RBP22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 HOMEZQ8IX15 550 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 PHOSPHO1Q8TCT1 267 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 AKAP1Q92667 903 aaKnown RBP eCLIP22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 STACQ99469 402 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 PPCSQ9HAB8 311 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 DUSP22Q9NRW4 184 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 ZCCHC3Q9NUD5 404 aaKnown RBP22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 GIN1Q9NXP7 522 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 MID2Q9UJV3 735 aa22.51■■□□□ 1.19
R3HDM4-208ENST00000626716 TRIM13O60858 407 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 BCKDHAP12694 445 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 SHC1P29353 583 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 ATP5J2P56134 94 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 RNPS1Q15287 305 aaKnown RBP22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 ZNF239Q16600 458 aaKnown RBP22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 TMEM201Q5SNT2 666 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 KANK2Q63ZY3 851 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 ALKBH2Q6NS38 261 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 LRIG3Q6UXM1 1119 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 CDS1Q92903 461 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 CPNE4Q96A23 557 aaPredicted RBP22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 S100PBPQ96BU1 408 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 CHMP6Q96FZ7 201 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 HOXD1Q9GZZ0 328 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 PIGUQ9H490 435 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 SIRT3Q9NTG7 399 aaPredicted RBP22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 ATP6V1HQ9UI12 483 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 RTTNQ86VV8 2226 aa22.5■■□□□ 1.19
R3HDM4-208ENST00000626716 SMIM23A6NLE4 172 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 KIAA1324LA8MWY0 1029 aaPredicted RBP22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 INAFM1C9JVW0 142 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 EFNA2O43921 213 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 FGF4P08620 206 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 NID1P14543 1247 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 ELK4P28324 431 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 ADH6P28332 368 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 ZNF117Q03924 483 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 ZNF844Q08AG5 666 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 FOXF1Q12946 379 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 LASP1Q14847 261 aaKnown RBP22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 DDIASQ8IXT1 998 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 GSPT2Q8IYD1 628 aaKnown RBP22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 RNF128Q8TEB7 428 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 ABHD3Q8WU67 409 aa22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 UBLCP1Q8WVY7 318 aaPredicted RBP22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 TACO1Q9BSH4 297 aaKnown RBP22.49■■□□□ 1.19
R3HDM4-208ENST00000626716 CADP27708 2225 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 GJE1A6NN92 205 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 ZNF195O14628 629 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 GCM2O75603 506 aaPredicted RBP22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 NUDT14O95848 222 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 ATP6V1C1P21283 382 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 PCLAFQ15004 111 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 KLHL26Q53HC5 615 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 ADAM5Q6NVV9 412 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 NUFIP2Q7Z417 695 aaKnown RBP22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 TUSC5Q8IXB3 177 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 C4orf33Q8N1A6 199 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 GABRG1Q8N1C3 465 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 ZNF527Q8NB42 609 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 FBXO27Q8NI29 283 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 RAB3IL1Q8TBN0 382 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 SRXN1Q9BYN0 137 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 GP6Q9HCN6 339 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 KLHL13Q9P2N7 655 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 LAMP3Q9UQV4 416 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 SNX8Q9Y5X2 465 aa22.48■■□□□ 1.19
R3HDM4-208ENST00000626716 TMEM114B3SHH9 223 aa22.47■■□□□ 1.19
R3HDM4-208ENST00000626716 H3BNH8 94 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms