RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CHCHD2Q9Y6H1 151 aaPredicted RBP16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 J3KTA2 159 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF264O43296 627 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 PRG2P13727 222 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 ENDOUP21128 410 aaKnown RBP16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 CYB561P49447 251 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 HLCSP50747 726 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 OC90Q02509 493 aaPredicted RBP16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 BROXQ5VW32 411 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 OR2T5Q6IEZ7 315 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 RTL4Q6ZR62 310 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 RANBP3LQ86VV4 465 aaPredicted RBP16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 CYP4Z1Q86W10 505 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 GPALPP1Q8IXQ4 340 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 CYP4Z2PQ8N1L4 340 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 TMCO5AQ8N6Q1 288 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 OR2T29Q8NH02 315 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF347Q96SE7 839 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 PIP5K1AQ99755 562 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 GALNT9Q9HCQ5 603 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 CARD8Q9Y2G2 431 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 ASPMQ8IZT6 3477 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 AP3D1O14617 1153 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 OIP5O43482 229 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 RHCEP18577 417 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 CASRP41180 1078 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF136P52737 540 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 SKP2Q13309 424 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 ISLR2Q6UXK2 745 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF550Q7Z398 422 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF440Q8IYI8 595 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 CATSPER1Q8NEC5 780 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 FAM71CQ8NEG0 241 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 RNF138Q8WVD3 245 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 SLC35B4Q969S0 331 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 ARSGQ96EG1 525 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 CENPNQ96H22 339 aaPredicted RBP16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 SH3YL1Q96HL8 342 aaPredicted RBP16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 SGCZQ96LD1 299 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 NR1H4Q96RI1 486 aaPredicted RBP16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 SECISBP2Q96T21 854 aaKnown RBP16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 MCHR1Q99705 422 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 BDH2Q9BUT1 245 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 PRR14Q9BWN1 585 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 TESMINQ9Y4I5 508 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 KCNMB2Q9Y691 235 aa16.3■□□□□ 0.2
PTCHD3-202ENST00000622555 C17orf51A8MQB3 221 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 HCRTR2O43614 444 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 TPST2O60704 377 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 F10P00742 488 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 CCL3P10147 92 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 CASP3P42574 277 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 CCR4P51679 360 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 SPIBQ01892 262 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF117Q03924 483 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 GANABQ14697 944 aaKnown RBP16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 PRAMEF20Q5VT98 475 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 SLC22A10Q63ZE4 541 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 LRRC69Q6ZNQ3 347 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 MISPQ8IVT2 679 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 PAQR8Q8TEZ7 354 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 UTP23Q9BRU9 249 aaKnown RBP16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 OSBPL11Q9BXB4 747 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 LAT2Q9GZY6 243 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 CTPS2Q9NRF8 586 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 RHCGQ9UBD6 479 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 TESQ9UGI8 421 aaKnown RBP16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 NTNG1Q9Y2I2 539 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 RAXQ9Y2V3 346 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 CELSR3Q9NYQ7 3312 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 PCNX3Q9H6A9 2034 aa16.29■□□□□ 0.2
PTCHD3-202ENST00000622555 C2orf72A6NCS6 295 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 CPSF4LA6NMK7 179 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 SEMA7AO75326 666 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 RRM2P31350 389 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 RYKP34925 604 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 GAS1P54826 345 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 TLE3Q04726 772 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 PIN1Q13526 163 aaPredicted RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 CBLN3Q6UW01 205 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 PLEKHM3Q6ZWE6 761 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 APLFQ8IW19 511 aaPredicted RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ICA1LQ8NDH6 482 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 DUSP19Q8WTR2 217 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 PRRC1Q96M27 445 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 SH2D2AQ9NP31 389 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 EXOSC3Q9NQT5 275 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 CNOT11Q9UKZ1 510 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 IGF2RP11717 2491 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 C1QTNF9BB2RNN3 333 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ADAM10O14672 748 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 FFAR1O14842 300 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ADAMDEC1O15204 470 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 GMFGO60234 142 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 EIF4E2O60573 245 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ADAM11O75078 769 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 WDPCPO95876 746 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 C1QTNF9P0C862 333 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 UQCRBP14927 111 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 CD96P40200 585 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms