RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SEC14L5O43304 696 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 CTAG2O75638 210 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 SLC22A3O75751 556 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 PEX19P40855 299 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 NME5P56597 212 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 SQLEQ14534 574 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 CD226Q15762 336 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 CDH24Q86UP0 819 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 CLEC4FQ8N1N0 589 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 ANKS4BQ8N8V4 417 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 GLB1L3Q8NCI6 653 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 SFXN5Q8TD22 340 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 FIG4Q92562 907 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 SH3YL1Q96HL8 342 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 CCT8L2Q96SF2 557 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 NEUROD4Q9HD90 331 aa16.18■□□□□ 0.18
SCAMP4-213ENST00000621748 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 NPIPA5A0A0B4J1W7 369 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 A0A1W2PNV4 684 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 A0A1W2PQD3 144 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 SLC22A20A6NK97 555 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 NPIPA7E9PJI5 369 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 SCDO00767 359 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 ANKRD28O15084 1053 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 SHOX2O60902 331 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 TNFRSF21O75509 655 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 TNFSF13O75888 250 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 FAM107AO95990 144 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 NPIPA8P0DM63 369 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 HPGDP15428 266 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 EEFSECP57772 596 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 PHC1P78364 1004 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 DPY19L1Q2PZI1 675 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 FLYWCH1Q4VC44 716 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 PDCD4Q53EL6 469 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 DCST2Q5T1A1 773 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 P4HA3Q7Z4N8 544 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 LUZP2Q86TE4 346 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 SMPDL3BQ92485 455 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 NRGNQ92686 78 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 MOAP1Q96BY2 351 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 ZNF845Q96IR2 970 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 MARK4Q96L34 752 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 OR7D2Q96RA2 312 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 PINK1Q9BXM7 581 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 SERHL2Q9H4I8 314 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 PCDHGB4Q9UN71 923 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 AP4B1Q9Y6B7 739 aa16.17■□□□□ 0.18
SCAMP4-213ENST00000621748 HRNRQ86YZ3 2850 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 HEATR5AQ86XA9 2040 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 FAM221AA4D161 298 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 RNASET2O00584 256 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 NDUFAB1O14561 156 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 SNX3O60493 162 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 SCN2BO60939 215 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 ATP6V1C1P21283 382 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 S100A3P33764 101 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 SOAT1P35610 550 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 RNF144AP50876 292 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 ATP4BP51164 291 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 RPS26P62854 115 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 KLHL26Q53HC5 615 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 C6orf120Q7Z4R8 191 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 GGNQ86UU5 652 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 KIF18BQ86Y91 864 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 OR8J2Q8NGG1 315 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 OR5D16Q8NGK9 328 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 LINC01560Q8TB33 94 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 FAM222BQ8WU58 562 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 GPATCH1Q9BRR8 931 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 RBM24Q9BX46 236 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 HHATLQ9HCP6 504 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 MED17Q9NVC6 651 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 DNAJB12Q9NXW2 375 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 ZIM2Q9NZV7 527 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 ARL2BPQ9Y2Y0 163 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 F8P00451 2351 aa16.16■□□□□ 0.18
SCAMP4-213ENST00000621748 A0A087WZY1 265 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 TUBAL3A6NHL2 446 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 A8MXE2 369 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 OIP5O43482 229 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 SOX30O94993 753 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 KRT16P08779 473 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 ALDOCP09972 364 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 ZNF17P17021 662 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 PSMA4P25789 261 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 PLPPR5Q32ZL2 321 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 ANXA8L1Q5VT79 327 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 OR2A2Q6IF42 318 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 CGB2Q6NT52 195 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 ANKRD46Q86W74 232 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 MISPQ8IVT2 679 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 GTPBP8Q8N3Z3 284 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 METTL25Q8N6Q8 603 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 CCDC197Q8NCU1 140 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 B4GALNT2Q8NHY0 566 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 FNDC9Q8TBE3 224 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 POC1BQ8TC44 478 aa16.15■□□□□ 0.18
SCAMP4-213ENST00000621748 PHOSPHO1Q8TCT1 267 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms