RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FAM57AQ8TBR7 257 aa12.98□□□□□ -0.33
CBWD3-217ENST00000621474 LRRC37BQ96QE4 947 aa12.98□□□□□ -0.33
CBWD3-217ENST00000621474 THUMPD3Q9BV44 507 aaKnown RBP12.98□□□□□ -0.33
CBWD3-217ENST00000621474 LDAHQ9H6V9 325 aa12.98□□□□□ -0.33
CBWD3-217ENST00000621474 MTHFD2LQ9H903 347 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-217ENST00000621474 BCL2L10Q9HD36 194 aa12.98□□□□□ -0.33
CBWD3-217ENST00000621474 SUCOQ9UBS9 1254 aaKnown RBP12.98□□□□□ -0.33
CBWD3-217ENST00000621474 RPH3AQ9Y2J0 694 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-217ENST00000621474 ZNF264O43296 627 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 DNAJA2O60884 412 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 SEMA7AO75326 666 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PGM3O95394 542 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 UBL4AP11441 157 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 BMP7P18075 431 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 TCEA1P23193 301 aaKnown RBP12.97□□□□□ -0.33
CBWD3-217ENST00000621474 MSX1P28360 303 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PRDX6P30041 224 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 CA7P43166 264 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 KCNJ10P78508 379 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 CDK6Q00534 326 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 TOMM34Q15785 309 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-217ENST00000621474 ZNF630Q2M218 657 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PRAMEF8Q5VWM4 474 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 C1QL3Q5VWW1 255 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PRAMEF7Q5VXH5 474 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 VASNQ6EMK4 673 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 SERPINA11Q86U17 422 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 CD163Q86VB7 1156 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 CALHM3Q86XJ0 350 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 VRK2Q86Y07 508 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 DOLPP1Q86YN1 238 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 OR14L1PQ8NHC6 308 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 B4GALNT2Q8NHY0 566 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PMM1Q92871 262 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 TIMP4Q99727 224 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PTGES2Q9H7Z7 377 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 PNPLA3Q9NST1 481 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 CALML5Q9NZT1 146 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 ERRFI1Q9UJM3 462 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-217ENST00000621474 DKKL1Q9UK85 242 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
CBWD3-217ENST00000621474 A0A0G2JPF8 293 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 HNRNPCL2B2RXH8 293 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 HNRNPCL3B7ZW38 293 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 SHISA8B8ZZ34 492 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 AIM2O14862 343 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 HNRNPCL1O60812 293 aaKnown RBP12.96□□□□□ -0.33
CBWD3-217ENST00000621474 GCM2O75603 506 aaPredicted RBP12.96□□□□□ -0.33
CBWD3-217ENST00000621474 DCTN3O75935 186 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 CSTAP01040 98 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 LINGO3P0C6S8 592 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 UBTFL6P0CB48 400 aaPredicted RBP12.96□□□□□ -0.33
CBWD3-217ENST00000621474 HNRNPCL4P0DMR1 293 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 NID1P14543 1247 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 ABOP16442 354 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 PSMA4P25789 261 aaKnown RBP12.96□□□□□ -0.33
CBWD3-217ENST00000621474 P2RX1P51575 399 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 PCBP3P57721 371 aaKnown RBP12.96□□□□□ -0.33
CBWD3-217ENST00000621474 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 IFNEQ86WN2 208 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 ZZZ3Q8IYH5 903 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 OR5M1Q8NGP8 315 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 UGT2B28Q9BY64 529 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 MED17Q9NVC6 651 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 ARL8BQ9NVJ2 186 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 RLIMQ9NVW2 624 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.33
CBWD3-217ENST00000621474 SH3BGRL2Q9UJC5 107 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 USP22Q9UPT9 525 aa12.96□□□□□ -0.33
CBWD3-217ENST00000621474 C15orf38-AP3S2A0A0A6YYH1 394 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 H3BNH8 94 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 EIF4E2O60573 245 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 TPOP07202 933 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 RNF224P0DH78 156 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 IL7RP16871 459 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 HK1P19367 917 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 EEF1A1P68104 462 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 RBPJQ06330 500 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 SCARB2Q14108 478 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 GXYLT1Q4G148 440 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 MRPL2Q5T653 305 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 REEP3Q6NUK4 255 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 C3P1Q6ZMU1 363 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF836Q6ZNA1 936 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 EIF3MQ7L2H7 374 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 COMTD1Q86VU5 262 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 LSRQ86X29 649 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 RPRMLQ8N4K4 120 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 METTL25Q8N6Q8 603 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 OR52P1PQ8NH57 321 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 POC1BQ8TC44 478 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 GPR119Q8TDV5 335 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 WDR60Q8WVS4 1066 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CNOT9Q92600 299 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 SARAFQ96BY9 339 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CMTM5Q96DZ9 223 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF583Q96ND8 569 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 LAT2Q9GZY6 243 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms