RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 BORAQ6PGQ7 559 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ADAMTSL4Q6UY14 1074 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CCDC28AQ8IWP9 274 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 PIANPQ8IYJ0 282 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 PRR18Q8N4B5 295 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 METTL25Q8N6Q8 603 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 POGLUT1Q8NBL1 392 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CRYGNQ8WXF5 182 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 POLE4Q9NR33 117 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ENAMQ9NRM1 1142 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 LHX3Q9UBR4 397 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 NUP188Q5SRE5 1749 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SFTPBP07988 381 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CDK4P11802 303 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 MAN2A2P49641 1150 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ZNF140P52738 457 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ARF1P84077 181 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 MYBPHQ13203 477 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 GPR18Q14330 331 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CDNFQ49AH0 187 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ZNF704Q6ZNC4 412 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC15A4Q8N697 577 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SAMD12Q8N8I0 201 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 NPRL2Q8WTW4 380 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 AKAP1Q92667 903 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 L3HYPDHQ96EM0 354 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC22A12Q96S37 553 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 BTBD2Q9BX70 525 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 HIPK2Q9H2X6 1198 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 NOSIPQ9Y314 301 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 DNAJC15Q9Y5T4 150 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 FXYD6-FXYD2A0A087WZ82 144 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 NPIPA5A0A0B4J1W7 369 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 NPIPA7E9PJI5 369 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 DLGAP1O14490 977 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 IFNA5P01569 189 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 MAS1P04201 325 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 GKN3PP0CG01 181 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 NPIPA8P0DM63 369 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 HTR6P50406 440 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 FAM189BP81408 668 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 IL10RAQ13651 578 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 APOFQ13790 326 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 TBRG1Q3YBR2 411 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 PLBD1Q6P4A8 553 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 AAED1Q7RTV5 226 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC16A14Q7RTX9 510 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CDS1Q92903 461 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CCDC74AQ96AQ1 378 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 THOC3Q96J01 351 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 MICU1Q9BPX6 476 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SYT11Q9BT88 431 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 FUNDC2Q9BWH2 189 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SORBS1Q9BX66 1292 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 FXYD6Q9H0Q3 95 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SEMA6CQ9H3T2 930 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 C6orf106Q9H6K1 298 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 TBX21Q9UL17 535 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 POLHQ9Y253 713 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SMIM30A4D0T7 59 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC1A7O00341 560 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 MAGEA12P43365 314 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 BLOC1S3Q6QNY0 202 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 TMEM173Q86WV6 379 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ZNF687Q8N1G0 1237 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CIDECQ96AQ7 238 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 LGALS12Q96DT0 336 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 DECR2Q9NUI1 292 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 UCKL1Q9NWZ5 548 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 IL37Q9NZH6 218 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 HSPB11Q9Y547 144 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 hCG_1809904A0A1W2PP81 198 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 A0A1W2PPE2 198 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 A0A1W2PR64 198 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 A0A1W2PRV1 198 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 G3V3Y1 287 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 BMP1P13497 986 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 DLSTP36957 453 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 GABRA2P47869 451 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 RAB11BQ15907 218 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 WBP2NLQ6ICG8 309 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 LCN8Q6JVE9 175 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 CNIH3Q8TBE1 160 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 TMIGD2Q96BF3 282 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 PINK1Q9BXM7 581 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 POTEKPQ9BYX7 375 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 DPH1Q9BZG8 443 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 ZNF350Q9GZX5 532 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 RIMS3Q9UJD0 308 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 FBXL3Q9UKT7 428 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 CMAHPQ9Y471 501 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 MEGF11A6BM72 1044 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 MROH6A6NGR9 719 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 HOXC11O43248 304 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 ADAP00813 363 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 DPP4P27487 766 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 AOAHP28039 575 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 SH3BP2P78314 561 aa9.18□□□□□ -0.94
CLTCL1-211ENST00000621271 CNN3Q15417 329 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms